KEGG   Tetrapisispora phaffii: TPHA_0L02160
Entry
TPHA_0L02160      CDS       T02235                                 
Symbol
TPHA0L02160
Name
(RefSeq) hypothetical protein
  KO
K13179  ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
Organism
tpf  Tetrapisispora phaffii
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpf03041]
    TPHA_0L02160 (TPHA0L02160)
   03009 Ribosome biogenesis [BR:tpf03009]
    TPHA_0L02160 (TPHA0L02160)
Enzymes [BR:tpf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     TPHA_0L02160 (TPHA0L02160)
Spliceosome [BR:tpf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    TPHA_0L02160 (TPHA0L02160)
Ribosome biogenesis [BR:tpf03009]
 Eukaryotic type
  90S particles
   Helicases
    TPHA_0L02160 (TPHA0L02160)
  Pre-60S particles
    TPHA_0L02160 (TPHA0L02160)
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII SecA_DEAD ERCC3_RAD25_C AAA_22
Other DBs
NCBI-GeneID: 11531789
NCBI-ProteinID: XP_003688001
UniProt: G8C089
Position
12:complement(448305..449801)
AA seq 498 aa
MSKRSREDDNSLEMEVLNVSSTSGKDENGNATVESFADLKLSEPTMKAIEKMGFENMTPV
QARTIPPLLAGRDVLGAAKTGSGKTLAFLLPAIEMLHSLKYKPRNGTGVIVITPTRELAL
QIFGVARELMEFHSQTFGIVIGGANRRQEADKLVKGVNMLIATPGRLLDHLQNTKGFVYK
NLKALIIDEADRILEIGFEDEMKQIIRILPKEDRQSMLFSATQTTKVEDLARMSLRKGPL
FINVVTDKDTSTADGLEQGYVVCESDKRFLLLFSFLKRNQKKKIIVFLSSCNSVKYYAEL
LNYIDLPVLELHGKQKQQKRTNTFFEFCNAERGILVCTDVAARGLDIPAVDWIVQFDPPD
DPRDYIHRVGRTARGTKGKGKSLMFLTPHELGFLRYLKAAKVPLNEYEFPTNKIANVQSQ
LEKLIKSNYHLHQIAKDGYRSYLQAYASHSLKTVYQIDKLDLTKVAKSYGFPIPPKVNIT
IGASGKTPTDKKRKTHRN
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgtcaaaacgttcaagagaggatgataatagtttagagatggaggtactaaatgtatcc
tccacttcaggaaaggatgagaacggtaacgccactgtcgaatcctttgcagatttgaag
ctatctgagccaactatgaaagctattgagaagatgggctttgaaaatatgactccagtt
caagctagaactattccacctttacttgccggtagagatgttttaggtgctgcaaagact
ggttctggtaagaccttagctttcttacttccagctattgaaatgttacattcgttgaaa
tataagccaagaaacggtaccggtgtcattgttattactcctactagagagttagcatta
caaattttcggtgttgctcgtgaattaatggaatttcattcacaaacgtttggcattgtt
atcggtggtgctaaccgtagacaagaagccgataagttagttaaaggtgtcaatatgttg
attgcaacccctggtagactactggatcatttacaaaatacaaaaggttttgtttacaaa
aatttgaaagctttgattattgatgaagctgatagaatattagaaattggtttcgaagat
gaaatgaagcaaattataaggattctaccaaaggaagatagacaatcaatgttattttct
gccactcagaccactaaagttgaagatctagctagaatgtctttaagaaagggtccatta
ttcattaatgttgtcactgataaagatacatctactgcagatggtttagaacaaggttat
gttgtttgtgaaagtgacaaaagattcctattattattctctttcttgaagagaaaccaa
aaaaagaaaatcattgtcttcttatcatcttgtaattctgtcaaatattacgcagaatta
ttgaactacatcgatttaccagttttagaacttcatggtaaacaaaagcaacaaaagaga
acaaacactttcttcgaattctgtaatgctgaaagaggtattctggtatgtaccgatgtt
gccgctagaggtttagatattccagctgttgactggattgttcaattcgatccacctgat
gatccaagagattatattcatagagtaggtagaactgcaagaggtacaaagggtaagggt
aagtctctgatgtttttaactccacatgaattagggttcttgagatatttaaaggctgcg
aaagttccattaaatgaatacgagtttcccacaaacaaaattgcaaatgtacaatcacaa
ttagaaaaactaatcaagtctaattaccatttgcaccaaatagctaaagatggttataga
tcgtacttacaagcttacgcttcacattcattgaaaactgtttatcaaattgataaatta
gatttaacaaaggttgccaaatcatatggtttcccaattcctccaaaggtaaatataaca
atcggtgctagtggtaaaacaccaactgataaaaaacgtaagactcatagaaactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system