KEGG   Thalassiosira pseudonana: THAPSDRAFT_23115
Entry
THAPSDRAFT_23115  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K10582  ubiquitin-conjugating enzyme E2 Q [EC:2.3.2.23]
Organism
tps  Thalassiosira pseudonana
Pathway
tps04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    THAPSDRAFT_23115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tps04121]
    THAPSDRAFT_23115
Enzymes [BR:tps01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.23  E2 ubiquitin-conjugating enzyme
     THAPSDRAFT_23115
Ubiquitin system [BR:tps04121]
 Ubiquitin-conjugating enzymes (E2)
  Ubiquitin-conjugating enzymes
   THAPSDRAFT_23115
SSDB
Motif
Pfam: UQ_con TetR_C_28 RWD
Other DBs
NCBI-GeneID: 7445948
NCBI-ProteinID: XP_002291075
JGI: 23115
UniProt: B8C5U5
Position
6:961987..965013
AA seq 556 aa
MVTKKGSTPLMCARKGGDSQHHIDVIQFLQCYIQRQLVETGKKLDSKNDDVTTPDIPTIR
HLSPVSSNLDDQPLATASAFHYTLPTPFRPHTSATATMSTNESTTNAFLHEVSVVDDTNG
GEVSSSSPSQVASSNSSGPTAIPAEDGDVALGKSAENDDGDAAANGENDAAVNGEDGADN
YNNSNEEEGGQDRGDDGDDDDESEYSYTYDEEDDGHYSGFLIPTDPFDNNRSVEDGSGAA
AASSSAAAAGVGTTSANVVDAMDAEESNNNTATISRAASGLSSSSTINVPEMNPSERKQK
WKEPTRAAVNMSLRAEKESKGGRRRLASDLYKIMMADTDEAGFSLEPCDEDSMDKWCIKL
FGFDCDSHLAKDLMVVGMDHVELEMSFPDDYPFEPPFVRVVRPRFKRQTGFVMNGALCME
LLTKDGWNPINDIESVIVSIRSLMVVGDGRLQAAVDMPEDAYKTALDAAMERSKAGKEGK
TTGLDEEEEDDNDGGPSKRKRVSSVDNGKSDDSAKKPSAASIGSYSAAEASSAYDHLSKF
HQEKGWDKSGWWARKG
NT seq 1671 nt   +upstreamnt  +downstreamnt
atggtcacaaagaagggaagcactccattgatgtgtgcgcgaaagggaggtgatagccaa
catcatatcgatgtgattcagtttttgcaatgttatattcaaaggcagttggttgagact
gggaagaagttggattcaaagaatgacgatgtgacgactccggatattcctacgattcgc
catctgagtcccgtctccagcaacctcgacgaccagcctttggccactgcctctgccttt
cactacaccctgcccacaccctttcggccgcacaccagtgccaccgccaccatgtcaacc
aacgaatccactaccaacgccttcctccacgaagtctccgtagtagacgacaccaacgga
ggcgaagtcagcagtagttcgccctctcaagtcgcttcctccaacagcagtggccccact
gccatccccgccgaagatggggatgtggccttgggaaagagtgcagaaaatgatgatggc
gatgctgctgccaatggggagaatgatgctgctgtcaatggagaagacggggcggacaat
tacaacaatagcaatgaagaagagggcggccaagatagaggcgacgacggcgacgacgac
gacgagagtgaatattcctacacttacgatgaagaagacgatgggcactattctggattt
ttgatccccactgatccttttgacaataatcgttcagtcgaggatggtagtggtgctgcc
gccgcctcgtcctccgcagcagctgccggagtcgggaccacctctgcgaacgtagttgac
gcaatggacgccgaagaatccaacaacaatacagccaccatctcccgagcagcctccggc
ctctcctcttcttccaccatcaacgtacccgaaatgaaccccagcgaacgcaagcagaaa
tggaaggaaccaacccgagcagccgtaaacatgtctctccgtgccgagaaggagtccaaa
gggggacgtcgtcggcttgcctcggacttgtacaagattatgatggcagatacagatgag
gcggggtttagtttggaaccgtgtgatgaggatagtatggataagtggtgtattaagttg
tttgggtttgattgtgatagtcatttggccaaggatttgatggttgtggggatggatcat
gtggagttggaaatgagctttccggatgattacccattcgagcctcccttcgtccgcgtc
gtgcgacctcgcttcaagcgtcaaaccggctttgtgatgaatggtgccctatgcatggaa
cttcttacaaaagacggctggaaccccatcaacgatattgaaagtgtcatcgtcagtatc
cgtagtcttatggttgtgggagacggacgattgcaagcggcggtagatatgcccgaggat
gcatacaagactgctttggatgctgcaatggagaggagcaaagctgggaaggagggcaag
actacagggttagatgaggaggaggaggatgataatgatggtggcccctcaaagcgaaag
agggtttcgtctgtggataatggaaagagtgacgattctgccaagaaaccatctgctgca
agtattggctcgtattctgccgcggaggcatcttctgcctatgatcatctatccaagttt
catcaggagaagggatgggataagtcgggatggtgggcgaggaagggataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (165)   
   KEGG ORTHOLOGY (1)   
   RefGene (160)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (177)   

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