KEGG   Thalassiosira pseudonana: THAPSDRAFT_31358
Entry
THAPSDRAFT_31358  CDS       T01078                                 
Name
(RefSeq) intraflagellar transport protein
  KO
K16474  intraflagellar transport protein 88
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:tps03037]
    THAPSDRAFT_31358
Cilium and associated proteins [BR:tps03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B1
   THAPSDRAFT_31358
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_12 TPR_16 TPR_19 TPR_14 TPR_6 TPR_8 TPR_7 ANAPC3 TPR_17 TPR_11 TPR_10 TPR_21 Foie-gras_1
Other DBs
NCBI-GeneID: 7445536
NCBI-ProteinID: XP_002286354
JGI: 31358
UniProt: B8BRP4
Position
1:2204514..2206240
AA seq 549 aa
MENQINKLIEETAQLKRGGQIEKALDKAKEGSKKDQLLRLHRKTHSLSGDFEMETTYATW
FNLASAYEANGMLDEALTAYTYLTKQRGQHLLTSRVRINMGNVYYAQSDFPSAIKMFKMA
LDQIRKDESSLTHKIFRNIGNSFFRLGSIRDAVKNYESVMDGAPDFQTGFNLLICHLVLG
DVESIKSDFIRLVEIPQNSDGPLSDDYEFIAPNGLSMTNDSLQQELATRSKESSRYFLTS
ARMIAPSLDSNNWSAGYDWVCNALKERHHEVLAAQLELEQAVQRLKHKEFMGAVKTLKNL
EKKGTAVKAKAATNLSFVKFLQGDIDRASKYADAALEADRYNADALVNKGNCFYVTEEYA
LAKELYLEAIGVQTDCAQAIFNLGLCNVQLELYEESIEAFENLHKITPNNPAVIYQVADI
YDLRGQTDDSTKWFNVLSARLSSDSTILSRLGYLNSQKKQEEGLHYQLESYRHNPVDLDV
ISNIGAWFVQQEMYEKSIYFFQQAALVQPKEIKWGLMAASAFRRTGDHQSALTLYEKLHD
QFPASIECE
NT seq 1650 nt   +upstreamnt  +downstreamnt
atggagaaccaaatcaataaactgatcgaagagacggctcaactcaaacgtggcggccag
atcgagaaagctctcgataaggcaaaggaaggtagcaagaaggatcagttgctcagactg
cacagaaagacgcattctctttccggtgactttgaaatggaaaccacctatgccacttgg
tttaacctagcttccgcctacgaggccaacggcatgctagatgaagccctcacagcgtac
acctacttgacgaagcagcgaggacagcatctcttgacaagccgtgtgcgtataaacatg
gggaatgtctactatgcccaaagcgactttccatctgcaatcaaaatgttcaagatggcg
ttggatcagatacgaaaagacgagagctctctgacgcacaagatctttcgaaatattggc
aactccttcttccgtctcggcagcatccgcgatgcagtcaagaactatgaatcggtgatg
gatggagctcctgactttcaaaccggattcaaccttctcatttgccacctagtattgggt
gatgtggaaagcatcaaaagcgatttcattaggcttgtcgagattccacaaaatagcgac
ggtcctctttccgacgactacgaattcattgctccaaacggtctatcaatgacaaacgat
agtcttcaacaggagctagcgactcgctcaaaggaatcaagccgctattttttgacttca
gcacgaatgattgctccgtcgttggacagcaataactggtctgctggatatgattgggta
tgcaacgctctcaaagagcgacatcatgaagttctcgctgcccaacttgaactagaacaa
gctgttcagcgactgaagcacaaagagttcatgggagctgttaaaacgctaaagaatctg
gaaaagaagggtactgcagtaaaagcaaaggcagccactaacctttcatttgtcaagttt
ctacagggagatatcgaccgtgcttcaaagtacgcagacgctgctctggaagcagatcga
tacaatgcagatgcattagtgaacaaaggaaactgcttctacgtcactgaagagtatgca
cttgcaaaggaattgtatcttgaagcgattggtgtccaaactgattgtgcacaggccatc
ttcaatctgggtttgtgcaatgttcaactagaattgtacgaagaatcgatcgaggcgttt
gagaaccttcacaagataacacccaacaacccagctgtcatttaccaagtagccgacata
tacgatcttcgaggacaaaccgatgattcaaccaagtggttcaatgttctatcagctcgt
ctctcaagcgattctaccattctctctagactcggctacctcaactcacagaagaaacaa
gaagaaggattacattatcagctggagagttacagacacaatccagtagatttggatgtg
atttcgaacattggtgcttggtttgttcagcaggaaatgtacgagaagagcatttacttc
tttcagcaagccgctctcgttcagccaaaagaaatcaagtggggtctcatggctgcgagt
gctttcagaaggactggggatcatcaaagtgctctgactctgtatgaaaagctgcacgat
caatttcctgcgagtattgaatgtgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (41)   

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