KEGG   Thermacetogenium phaeum: Tph_c11340
Entry
Tph_c11340        CDS       T02276                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
tpz  Thermacetogenium phaeum
Brite
KEGG Orthology (KO) [BR:tpz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tpz03016]
    Tph_c11340 (truB)
Enzymes [BR:tpz01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     Tph_c11340 (truB)
Transfer RNA biogenesis [BR:tpz03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Tph_c11340 (truB)
 Prokaryotic type
    Tph_c11340 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 PUA TruB_C
Other DBs
NCBI-ProteinID: AFV11356
UniProt: K4LE97
Position
1151161..1152096
AA seq 311 aa
MNGLINVLKPPGITSHAVVLSLRRLFRVQKIGHTGTLDPGAAGVLPICVGQGTRVAEYLV
NKPKSYRAEMTFGITTETHDAGGKVLKRLPGVKLERARVEEVLQDFIGEIKQVPPMTSAL
HYRGKRLYKLAREGKTVDRRARKVHIYEIKLIRFDGELPYPRLLCDITCSKGTYVRSLCA
DIGEKLGCGAFLSFLVRTASGPFQLSVSYTLEEIKDRYERQDFSFLLPIDYALEEFPALI
VKEKAVPHVLNGQPLAPAGIMGGVGKSDRPLVVRLYAPDGSLLALGNYRCSKNGEWYYKP
QKVFCLLHQNI
NT seq 936 nt   +upstreamnt  +downstreamnt
gtgaatggtttgattaacgttttaaaaccgccggggattacttcccatgcggtagtgcta
agtttgcggcgccttttccgggtgcagaaaatcggtcatacgggtactctggacccggga
gcggcgggtgttctcccaatttgcgttggacagggtacaagggttgccgaataccttgtc
aacaaaccgaaaagttatcgtgctgagatgacctttggcatcacgaccgaaacccatgat
gccggtggtaaggtgctcaagaggcttccaggtgtcaagcttgaacgtgcgcgagtagaa
gaggttttgcaggattttatcggggaaatcaaacaggtgcccccgatgacgtcggccctt
cactaccgagggaagaggctttataagctggcgcgtgaggggaaaacggtagatcgcagg
gcgaggaaggttcatatttatgaaatcaaattgatccgctttgatggcgagctaccctac
ccgcgcttgttgtgtgatatcacctgctccaagggcacctatgtgcgcagcctgtgtgca
gatatcggcgaaaagctgggatgcggtgcctttttatcctttctggttcgaacagccagc
ggtccctttcagctgagcgtttcctacacactggaagaaataaaagatagatatgaaagg
caggatttttccttcttgctccctatcgattatgcgctggaggaattccccgctctgatc
gtgaaagagaaggctgtgcctcatgtcttgaacggccagcctctggctccggcgggaatc
atgggaggggtgggaaagagtgacaggcctctcgtggtccgcctttacgcaccggacggc
agtcttttagccctaggcaactaccggtgctcaaaaaacggtgagtggtactataaaccg
caaaaagtcttttgtcttctccatcaaaatatataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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