KEGG   Takifugu rubripes (torafugu): 101077654
Entry
101077654         CDS       T02386                                 
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
  KO
K12811  ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101077654 (ddx46)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tru03041]
    101077654 (ddx46)
Enzymes [BR:tru01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     101077654 (ddx46)
Spliceosome [BR:tru03041]
 Complex A
  U2 snRNP components
   U2 related factors
    101077654 (ddx46)
 Complex B
    101077654 (ddx46)
SSDB
Motif
Pfam: DEAD Helicase_C CdAMP_rec
Other DBs
NCBI-GeneID: 101077654
NCBI-ProteinID: XP_011609658
Ensembl: ENSTRUG00000008878
UniProt: H2TCC6
Position
15:10180666..10188408
AA seq 1060 aa
MGRESRHYRKRSSSRGRTGSRSKSRSPDKRSKKDDRDRSRRERSRSRDRRRSRSRDRKRA
RRSRSRDRRRSRSRERRRSNSRTRTRRSRSGSPTKSRRDESSKSKEKDSVEPVSEKKKVK
EEKEDEKVEDQDFDQNKLEEEMRKRKERVEKWREEQRKKAIENIGEIKKELEEMKQGKKW
SLEDDEDDDEDVSAPMEGNDDEDGEEKGEKKDSDIKEEKTEGEDKEKDSPMELEAEDDVD
PLDAYMEEVKQEVKKFNIGPMKGNDKKGAMTVTKVVTVVKTKKGPHTHKKKGELMENDQD
AMEYSSEEEEVDLQTALTGFRTKQRKVLEPVDHEKIQYESYRKNFYVEVPELAKMSQEDV
NAYRLELEGIIVKGKGCPKPIKTWVQCGVSMKILSALKKHGYEKPTPIQAQAIPAVMSGR
DLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEESEGPISVIMTPTRELALQITKECKKFSK
PLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYMVLDE
ADRMFDMGFEPQVMRIVDSVRPDRQTVMFSATFPRAMEALARRILNKPIEVQVGGRSVVC
SDVEQHVLVIEEDKKFLKLLELLGHYQERGSVIIFVDKQEHADALLKDLMKASYPCMSLH
GGIDQYDRDSIINDFKNGACRLMVATSVAARGLDVKQLILVVNYNCPNHYEDYVHRAGRT
GRAGNKGFAYTFITEDQVRYAGDIIKALELSGSSVPPELEQLWVSFKDQQKAEGKVIKSS
SGFSGKGFKFDETEHALANERKKLQKAALGLQDSDDEDGALDIEEQIESMFNSKKRVKDM
SAPGALPGAAGAVSSPAAGVTGGLPGLGPPSAGNIQKLEMAKRLALKINAQKNLGAEAQD
VMQQATNAILRGGTIMTPSVSAKTIAEQLAEKINAKLNYTPVEKLEEERQAAEQVETVTR
YEEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLAIE
SANELAVQKAKTEITRLIKEELIRLQNSYQPISKGRYKVL
NT seq 3183 nt   +upstreamnt  +downstreamnt
atggggcgtgaatcaagacactacagaaaacgttcctcatctcggggacggacgggtagc
cggtcgaaaagtcgctctccggacaagcgctccaagaaagacgaccgagatcggagcaga
agagagcgctctcggagccgggaccgacgcaggtcccggtccagagacaggaaaagagcc
aggcgctccaggagcagagacaggcggagatccagaagccgagagaggagaaggtctaac
agtaggaccaggactcggaggtcccggtctggcagccccaccaagagtaggagagatgaa
agttcaaagagcaaagagaaagacagcgtggagcctgtatctgagaagaaaaaggttaag
gaggagaaagaggatgaaaaagtagaggaccaagactttgaccagaataaactggaagaa
gagatgagaaagaggaaggagcgtgtggagaagtggagggaagagcagagaaagaaggca
attgaaaatattggcgagatcaagaaggaattggaagaaatgaagcagggaaagaaatgg
agcctggaggatgatgaagatgatgatgaggatgtttcagcaccaatggaaggaaacgat
gatgaagatggtgaagagaagggggagaagaaagacagtgatataaaggaggagaagaca
gagggggaagacaaggaaaaagacagtccgatggagctggaggctgaggacgatgtggat
ccactggatgcctacatggaggaggtgaaacaggaagtgaaaaagtttaacatcgggccc
atgaaaggaaatgataagaaaggagcaatgaccgttaccaaagtggtaacagtggtcaaa
accaagaaggggcctcacactcacaagaagaagggagagctgatggagaatgaccaggat
gccatggagtactcatccgaggaggaggaggtggatctgcagacagctcttactgggttc
cggaccaaacagaggaaggtcctggagcctgtggaccatgaaaagattcagtatgagtct
taccgcaaaaacttctacgtggaggtccctgagcttgccaagatgagtcaagaggatgtg
aatgcatacagactggaactggaaggcatcatcgttaaaggcaagggctgtcccaaaccc
atcaagacctgggtgcagtgtggagtttcaatgaagatcctcagcgctctaaagaagcac
ggctatgagaagcccactcctatccaggcccaggcaatcccagctgttatgtctggcaga
gacctcattggcatcgctaaaaccggcagcggcaaaacaatagctttccttctgcccatg
ttccgacacatcatggaccagcggccgctagaggagtccgagggaccgatatcggtaatt
atgactccgaccagagagttggccctgcagattaccaaggagtgcaagaagttctctaaa
ccgctggggctcagggtggtgtgtgtttatggaggcaccggtatcagcgaacagattgcg
gagctgaagagaggagccgagatcatcgtgtgcaccccaggaagaatgattgacatgttg
ggggccaacagtggtcgagttaccaacctgcgcagggtcacgtacatggtgctggatgaa
gcagatcggatgtttgacatggggtttgagccacaggtgatgcgtattgtggacagtgtt
cgtccagatcgtcagacagtcatgttttcagccaccttccccagagccatggaggcactt
gcccgtagaattctgaacaagcctattgaagtccaggtggggggtcgcagcgtggtttgc
tcggacgtggaacagcatgtgttggtgattgaggaggacaagaaattcttgaagctgctg
gagcttctgggtcactaccaagagaggggctcggtcatcattttcgtggacaaacaggag
catgcagacgccttgttaaaagacctgatgaaagcctcgtacccctgcatgtctctgcac
ggaggaattgatcagtacgacagagacagcatcatcaacgattttaagaacggcgcctgt
cgcctgatggtggccacctctgtggcagccagaggcctggacgtcaaacagctcattctg
gttgtcaactacaactgcccaaaccactatgaggactacgtccacagggctggacgcacg
ggccgagccggcaacaagggcttcgcctacactttcatcacagaagatcaggttcgctat
gctggtgacatcatcaaagctttggagctgtcgggctcttctgtcccgcctgaactggaa
caactatgggtgtcgtttaaagatcagcagaaagcggagggtaaagtcatcaagagcagc
agcggtttctcaggaaaaggctttaagtttgatgagacagaacatgcgctggccaatgag
aggaagaaactgcagaaggctgctctgggccttcaggattcagacgacgaagatggagcc
ctggatattgaggagcaaatcgaaagcatgtttaattcaaagaagagggtgaaggacatg
tctgctcctggggccctccctggagctgccggagctgtttccagcccagcagctggagtt
acgggaggacttccaggtcttggacccccctctgctggaaacatccagaaactagagatg
gccaagaggctggcactcaagatcaacgcccagaagaacctgggggccgaggctcaggac
gtgatgcagcaggccaccaacgccatcctgcggggcggcaccatcatgacgccctccgtg
tcagccaagaccatcgcggagcagctggcagaaaagatcaatgccaagctgaactacacc
cccgtggagaagctggaggaggagcgacaggcggcggaacaggtcgagaccgtcacgaga
tacgaggaggagctggagatcaacgacttccctcagactgcgaggtggaaggtgacatct
aaagaagccctgcagaggatcggtgaatactctgaagctgccatcaccatcaggggaact
tatttccctccaggcaaagagcccaaagagggagaacgcaagatctacctggctattgaa
agtgcgaatgaactggctgtgcagaaagcaaaaacagagatcacaagattaatcaaggaa
gaactcatcagattacaaaattcctaccagcctatcagcaaaggccgatacaaagtgttg
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG ORTHOLOGY (1)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (64)   

Download RDF
DBGET integrated database retrieval system