KEGG   Thamnophis sirtalis (common garter snake): 106551485
Entry
106551485         CDS       T06107                                 
Name
(RefSeq) sodium channel protein type 3 subunit alpha
  KO
K04836  voltage-gated sodium channel type III alpha
Organism
tsr  Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:tsr04040]
    106551485
Ion channels [BR:tsr04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   106551485
SSDB
Motif
Pfam: Ion_trans Na_trans_cytopl Na_trans_assoc PKD_channel GPHH ATP-synt_B IQ IQCJ-SCHIP1
Other DBs
NCBI-GeneID: 106551485
NCBI-ProteinID: XP_013925070
UniProt: A0A078N233
Position
Unknown
AA seq 2003 aa
MAQTLLVPPGPDSFCFFTRESLAAIEKRCTEEKAKRPKQEHTDNDDESGPKPNSDLEAGK
TLPFIYGDIPPGMGSEPLEDLDPYYSNKKTFIVLNRGKTIFRFSATSALYILTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPEWTKNVEYTFTGIYTFESLIKILARGFC
LEGFTFLRDPWNWLDFSVILMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLLWPLDNSTLEGNITSHFNSTE
GDNDTFVNMTVTTFNWEEYIEDESHFYVLEGQRDALLCGNSSDAGQCPEGYMCVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQTTAAVAAASVASRDFSGVG
GLGELLESSSEASKLSSKSAKDRRNKRKKKKQKELSEAEDKEEAERYPKSESEDSIRRGG
RLSYEKRTSTHQSLLSFRGSLFSPRRNSRTSIFSFRGRVKDIGSENDFADDEHSTLEDNE
SRRDSLFVPNRQTSERRNSTTSQISLSSKMVPVLPANGKMHSTVDCNGVVSLMGGPPALP
SPTGQFLPEGTTTETEIRKRRLSSYQISMELMEESAARQRAMSIASILTNTMEELEESRQ
KCPPCWYRFANVFLIWDCWLPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPM
TSDFYQVLSVGNLVFTGIFTAEMILKIIAMDPYYYFQEGWNIFDGIIVSLSLMELGLANV
EGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLF
GKSYKECVCKIAEDCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLIVF
MLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNETNNLQIAVARIQKGIDYIKKKLGE
IVQKGTVRKQKAIDDIKVLEELNHKKDVCISNHTMAEITKDVNYLRDGNGTTSGLGTGSS
VEKYIIDENDYLSFINNPGLTVTVPIAVGESDFENINTEEFSSESELEGSKEKINATSSS
EGSTVDVALPGEGEQAEIEPEEALEPEACFTEGCIQKFPCCQVSIEDGKGKIWWNFRKTC
YCIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYSDKVFTYIFILEMLLKW
VAYGFQIYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFE
GMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGEMFNISDVN
NKTECDELIHNNQQARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDVEEQP
YYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPGNKFQGLVFDFVTKQAFDITIMILICLNMVTMMVETDDQSKEMEI
ILSRINLVFIILFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVS
PTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSN
FAYVKREVGIDDLFNFETFGNSMLCLFQITTSAGWDGLLAPILNSGPPDCDPEIDHPGSS
VKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEV
WEKFDPDASQFIEYSKLSDFAASLDPPLLIAKPNNVQLISMDLPMVSGDRIHCLDILFAF
TKRVLGESEEMDLLRVQMEDRFMAANPSKVSYEPITTTLKRKQEEVSATIIQRAFRHFLL
KQKVKKVTSMYNKEKCRDGEVLPIKDVTSDRFNGNSSPEKTNESSSTTSPPSYDSVTKPN
KEKYEKGKTERDFKGKDIKISKK
NT seq 6012 nt   +upstreamnt  +downstreamnt
atggcacagacactgctggtaccaccaggacctgacagtttctgcttttttactagagaa
tctcttgcagctattgaaaaacggtgcacagaagagaaagcgaaaaggcccaaacaagaa
catacggataacgatgatgagagtgggccaaaaccaaatagtgacttggaagcaggaaaa
acacttccctttatatatggcgatattcctcctggaatggggtccgaaccattggaggac
ctggacccttactatagcaataaaaaaaccttcattgtgttgaatagagggaagacaatt
ttccgattcagtgccacatctgccttgtacattttaaccccttttaatcctctcagaaaa
attgctattaaaattttggtacattcattgttcagcatgcttattatgtgcactattttg
accaactgtgtatttatgaccatgagtaatcctccagaatggacgaagaatgtagagtac
acattcactggaatttatacctttgaatcacttataaaaatccttgcaaggggcttttgt
ttagaagggtttacttttcttcgagatccctggaattggcttgacttcagtgtcattttg
atggcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctttgaaaactatttctgtaattccaggcctgaagacaattgtaggggcc
ctcattcaatctgtgaagaagctctcagatgtcatgatcctgaccgtgttttgtctgagt
gtatttgcactaatagggctccaacttttcatggggaacctgaggcataaatgcttgctg
tggccattggacaattctactttagaaggaaacatcacttcccacttcaatagcacggag
ggagacaatgatacctttgtaaatatgacagtgaccacttttaactgggaggaatacatt
gaggatgaaagtcatttttatgttttggaaggacagcgagatgcacttctttgtggtaat
agctcagatgctggccaatgcccagaaggatacatgtgtgtaaaagctggtagaaacccc
aactacggctacacaagctttgacaccttcagctgggccttcttgtcactctttcggctg
atgactcaggacttctgggaaaatctttaccaactgactctacgtgctgctggcaaaacg
tacatgatcttttttgtcctggtgattttcttgggttctttctacctgatcaacttgatc
ctggctgttgttgccatggcttatgaagagcagaatcaagccaccatggaagaagctgag
cagaaagaggcagagttccaacagatgctggaacagctgaaaaaacagcaagaagaggct
cagacaacagcagctgtggcagcagcatcagtagcatccagagatttcagcggcgtgggt
ggattgggggagctcttggaaagttcttcggaggcatctaaattaagctcaaagagtgcc
aaagacagaaggaacaaaaggaaaaaaaagaagcagaaagagctctcggaagcagaagat
aaggaagaagcagagaggtatcctaagtctgaatcggaagacagcatcagaaggggaggt
cgcttgtcctatgaaaagagaacctcaactcaccagtctttgctgagctttcgtggctct
ctgttctccccgcggcgcaacagcagaacaagtattttcagcttccgagggagagtgaag
gatattgggtcagagaatgactttgctgatgatgaacacagtactctggaagacaatgag
agcaggagagattctctctttgttccaaacagacaaacaagtgagcgtcgcaacagtact
accagtcaaatcagcctgtcatcaaagatggtgccggtgcttcctgcaaacggaaagatg
cacagcacagtggattgcaatggtgttgtttccttaatgggaggacctcctgctctccct
tcacctactggacaatttttaccagagggcacaacaactgaaacagaaataagaaaaaga
agattaagttcttatcaaatttcgatggagctgatggaagaatctgcagcaaggcagaga
gccatgagtatagccagtatcctaacaaatactatggaagaacttgaagaatctcgacag
aagtgtccaccgtgctggtatagatttgcaaatgttttcttgatctgggattgctggctc
ccttggttaaaagtaaagcacatcgtcaatttgatagtgatggatccatttgtcgatctt
gccattactatctgtatagttttgaatacactgtttatggccatggaacattatccaatg
acttctgatttctaccaagtactttcagtgggaaacctggttttcactgggatcttcact
gcagagatgatcctcaaaataattgccatggatccttattattatttccaagaaggctgg
aatattttcgatggcatcatagtcagcctgagtttgatggagttgggtcttgcaaatgtg
gaagggttgtctgttctaagatccttcagattgcttcgtgttttcaaattagcaaaatcc
tggccaacgttaaatatgctgatcaaaattattggcaactctgttggtgctttgggaaat
ctgactttggtcctggccatcattgtcttcatttttgctgtggttggtatgcagctcttt
ggtaaaagctacaaggaatgtgtgtgcaagatcgcagaagattgtgaactccctcgctgg
cacatgaatgattttttccactctttcttgatcgtgttccgagttctttgcggagaatgg
atagaaaccatgtgggactgtatggaggttgcaggccaaaccatgtgccttattgttttc
atgttggtcatggtgattggaaatttagtggtattaaacctgtttctagccttgctcctg
agctccttcagttcagacaatcttgctgctactgatgatgataatgagacgaacaatctc
cagattgctgtagcgaggattcagaaaggaatagattacattaagaaaaaattgggagaa
attgtccaaaaaggcacagttagaaagcagaaagctatagacgatatcaaagtccttgaa
gaactaaaccacaagaaagatgtctgcatttccaaccacaccatggctgaaataactaag
gatgttaattatctgagagatggaaatggaacgaccagtggtttaggaacaggcagcagt
gtggaaaaatatattattgatgagaatgattacctgtcatttataaacaatccaggcctt
actgtaactgtaccaatcgcagtgggagagtcagattttgaaaatataaacacagaagaa
tttagcagtgaatctgagctggaaggaagcaaagagaagataaatgccaccagctcatct
gaaggcagtactgtggatgttgccctgccaggagagggggagcaggcagagattgaaccc
gaagaagctcttgagcctgaagcctgtttcacggaaggctgcatccaaaagttcccatgt
tgtcaagtgagtatagaagatggcaaaggaaaaatctggtggaattttagaaaaacctgc
tactgcattgttgagcataactggtttgaaacattcattgtatttatgattctcctcagc
agtggtgctctggcctttgaagatatatatattgaacagcgtaagactatcaagacaatg
ctggaatattcagacaaagtcttcacatacattttcattctagaaatgcttttgaaatgg
gtggcctatggcttccagatttatttcacaaatgcctggtgttggctggattttttaatt
gttgatgtttcattggtcagtttagtagccaatgcactaggctattctgaattaggagcc
attaaatcacttcgaacactaagagcattgaggcctttaagagctctgtcacgttttgaa
ggaatgagggtggttgttaatgcccttgttggagcaattccctccattatgaatgtgctt
ctggtttgtctcatattttggctgatctttagtattatgggtgtgaatctctttgctggc
aaattctaccattgcgttaataccacaacgggtgaaatgttcaacatcagtgatgtcaac
aataaaactgaatgcgatgagctaatacacaacaatcagcaagcccgatggaaaaacgtg
aaagttaactttgataacgttggggctggttatcttgctctgcttcaagttgctactttt
aaagggtggatggatattatgtatgcggctgttgattcacgggatgtagaagaacaaccc
tattatgaggataacctatatatgtatctttactttgttatcttcatcatctttggatca
ttttttaccttaaacctcttcattggtgtcattatagataatttcaatcagcaaaagaag
aagtttggaggacaagacatttttatgacagaggaacagaaaaaatattacaatgcaatg
aaaaagctgggttccaaaaaaccacaaaagccgataccaagaccagggaataaatttcaa
ggattagtctttgactttgtaaccaaacaagcctttgacatcactatcatgattcttatt
tgccttaatatggtcaccatgatggttgaaacagatgaccaaagtaaagaaatggaaatt
attttatccaggattaacttggtattcataattcttttcactggagaatgtgtactcaaa
ctgatttcacttcgtcattattattttaccattggctggaatatttttgattttgtcgtc
gtcattctctccattgtaggaatgttcctcgcagagattattgagaaatattttgtgtcc
cccaccttgttccgagtaattcgacttgcccggataggtcgaatcctgcgtctaatcaag
ggggcaaaggggatccgcactctgctttttgccttgatgatgtctctccctgccttgttc
aacattggtctcctgcttttcctggtcatgttcatctacgccatatttggaatgtccaac
tttgcctacgtgaagagagaagttggtattgatgacttgttcaattttgaaacttttggc
aacagcatgctttgtcttttccaaattaccacttctgctggctgggatggcctactagcg
cccatcctaaacagcgggcctccagattgtgaccctgagatagaccatccgggtagctca
gtcaagggagactgtggcaatccttcggttgggattttcttctttgtcagctacattatc
atctcatttttagttgtagtgaacatgtacattgctgtcattttggagaacttcagtgtg
gctactgaagaaagtgctgaacctctgagcgaggatgattttgagatgttctatgaagtc
tgggaaaagttcgatccagatgcatcccaatttatagaatatagtaaactttccgatttt
gctgcttcattggatcctcctcttctgattgccaaaccaaacaatgttcagctaatttca
atggacctgcccatggtgagtggcgatagaatccactgccttgacatcttgtttgctttt
acaaagcgtgtcttgggagaaagcgaagaaatggatttactcagagtgcagatggaagac
cgcttcatggcagccaatccatccaaagtttcatatgaaccaatcactaccacattaaag
cgaaagcaggaggaggtgtccgctaccattatccagcgggctttcaggcatttcctcctc
aaacagaaagttaaaaaagtaacttctatgtataataaagaaaaatgcagagatggcgag
gtcctacccatcaaagacgtgacctctgataggtttaatgggaattccagtccagagaaa
accaatgagagttcctcgaccacctctcccccttcctatgatagtgttactaagccaaac
aaagagaaatatgaaaagggcaaaacagagagagactttaaagggaaagatataaaaatt
agcaaaaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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