KEGG   Tumebacillus avium: CBW65_17240
Entry
CBW65_17240       CDS       T04874                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
tum  Tumebacillus avium
Pathway
tum03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CBW65_17240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tum03019]
    CBW65_17240
   03016 Transfer RNA biogenesis [BR:tum03016]
    CBW65_17240
Enzymes [BR:tum01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     CBW65_17240
Messenger RNA biogenesis [BR:tum03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CBW65_17240
Transfer RNA biogenesis [BR:tum03016]
 Prokaryotic type
  tRNA degradation factors
   CBW65_17240
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 DIMCO_N
Other DBs
NCBI-ProteinID: ARU62511
UniProt: A0A1Y0IPS8
Position
3525919..3528168
AA seq 749 aa
MHRTFTTTLGGRTLTIETGKLAKQASGSVLVRYGETVILCTVTASKEPKDLDFFPLTVNY
EERLYAAGKIPGGFIKREGRPSEKAILASRLIDRPVRPLFPEGFRNDVQIVDIVMSVDQD
CAPEIAAMIGTSAALMLSDVPFEGPIAGVIVGRVDGQLVINPTVQQTEQSDLHLVVAGTK
EAINMVEAGAKFVSEQDMIEAIMFGHDAIKELIAFQEQMIAEIQPVKMAVVLHEVDAEVN
EQVRAMATDKLKEAIRTFDKHEREANISVVKEDVRAAMLELLGEDNYKAKQKDIDEVLYD
IVKEQVRYSIVHEGIRPDGRAVDEVRPVATEVAILPRVHGSGLFTRGQTQALSICTLGAL
GDAQTIDGLGLEEEKRFMHHYNFPPFSVGEARPLRAPSRRDIGHGALGERAIEPIIPNEE
EFPYTIRLVSEVLESNGSSSQASICGSILALMDAGVPIKAPVAGVAMGLIADGDKMVVLT
DIQGMEDHLGDMDFKVAGTSEGITALQMDIKIKGINRQVLEQALEQAHRGRAHIMAKMME
AISESRPELSPYAPRIITMRINPDKIRDVIGPGGRVINKIIDETGVKIDIEQDGRVFIAA
TDAQAGYRAKEIIENIVAEVEAGATYNGTVTRVEKYGAFVELLPGKEGLVHISQLGDERV
AKTEDVCNVGDKLMVKVTEIDSQGRVNLSHREALRELRGEPPTPLEEIQRQVKAARERSG
GPSRGGDRGGDRGGDRNRDRGERPARPRT
NT seq 2250 nt   +upstreamnt  +downstreamnt
atgcatagaacgtttacaactacactcggaggccgcacgctgacgatcgagacaggcaaa
ctcgcgaaacaggcgagcggctctgttctggttcgctatggcgaaacggtgatcctctgt
actgtcaccgcatcgaaagaaccgaaagacctcgatttcttcccgctcaccgtcaactat
gaagagcgtttgtacgcggccggcaagatcccgggcggtttcatcaaacgtgaaggacgc
ccgtccgaaaaagcgatcctggccagccgcctgatcgaccgtccggtgcgccccttgttc
ccggaaggattccgcaacgacgtgcagatcgtcgacatcgtcatgtcggtcgaccaggac
tgcgcgccggagatcgccgcgatgatcggcacctctgctgcgctgatgctgtctgacgtg
ccgtttgaaggcccgatcgccggcgtcatcgtcggccgtgttgatggacagctggtgatc
aacccgaccgttcagcaaacggagcagtccgacctgcacctcgttgtcgccggtaccaaa
gaagcgatcaacatggtcgaagcgggcgcgaagttcgtctccgagcaggatatgatcgaa
gcgatcatgtttggccatgatgcgatcaaagaactgatcgcgttccaagagcaaatgatc
gcagagattcagccggtgaaaatggctgtcgtcctgcacgaagtggacgctgaagtcaac
gagcaagtccgcgccatggcgacggacaagctcaaagaagcgatccgcaccttcgacaag
catgagcgcgaagcgaacatctccgttgtcaaagaagatgtgcgtgcagcgatgctcgaa
ctgcttggcgaagacaactataaagcaaaacaaaaagacatcgatgaagtcctctacgac
atcgtcaaagaacaagtgcgctactcgatcgtccacgaaggcatccgtccggacggccgc
gcggttgacgaagtgcgcccggtcgcgaccgaagttgcgatcctgccgcgcgtgcacggc
tccggcctcttcacccgcggacaaacccaagcgctgtcgatctgtacgctcggcgcgctt
ggcgatgcgcagaccatcgacggccttggccttgaagaagagaagcgctttatgcaccac
tacaacttcccgccgttctccgtcggcgaagcgcgtccgctgcgcgctccgtcccgccgc
gatatcggtcacggcgcgctcggcgagcgtgccatcgagccgatcatcccgaacgaagag
gaattcccgtacacgatccgcctcgtctccgaggtgctggaatcgaacggctcctcctcg
caggcttccatctgcggctccatcctcgccctgatggacgcaggcgtgccgatcaaagca
ccggtagccggtgtggcgatgggcctgatcgcagacggtgacaagatggttgtcctcacc
gacatccaaggcatggaagaccacctcggcgacatggacttcaaggtcgcagggaccagc
gaaggcatcaccgcgctgcagatggacatcaagatcaaaggcatcaaccgccaagtgctg
gaacaggcgctggagcaggcgcaccgcggccgcgctcacatcatggcgaaaatgatggaa
gcgatctccgagtcgcgtccggagctctcgccgtacgcgccgcgcatcatcacgatgcgc
atcaacccggacaagatccgcgatgttattggaccgggcggccgcgtgatcaacaagatc
atcgacgagaccggcgtcaagatcgacatcgagcaggatggccgcgtcttcatcgccgcg
accgatgcgcaagcaggctatcgcgcgaaggagatcatcgaaaacatcgttgctgaggtg
gaagcaggcgcgacgtacaacggcaccgtcacccgcgttgagaaatacggcgcgtttgtc
gaactcctgccgggcaaagaaggcctcgtgcacatctcccaactgggcgatgagcgcgta
gcgaaaacggaagacgtgtgcaacgtcggtgacaagctgatggtcaaagtcaccgagatc
gactcccaaggccgcgtcaacctctcgcaccgcgaagcgcttcgtgagctgcgcggcgag
ccgccgacgccgctggaagagatccagcgtcaggtcaaagcagcgcgtgaacgctccggc
ggtccgagccgtggcggagatcgcggtggtgaccgtggcggcgatcgcaaccgcgaccgc
ggcgaacgtccggcacgtccgagaacctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (42)   

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