KEGG   Tupaia chinensis (Chinese tree shrew): 102488079
Entry
102488079         CDS       T02978                                 
Symbol
LNX1
Name
(RefSeq) ligand of numb-protein X 1
  KO
K10692  ligand of Numb protein X 1/2 [EC:2.3.2.27]
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:tup00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tup04121]
    102488079 (LNX1)
Enzymes [BR:tup01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102488079 (LNX1)
Ubiquitin system [BR:tup04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Ligand of Numb proteins
    102488079 (LNX1)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-RING_5 TRAF3_RING U-box
Other DBs
NCBI-GeneID: 102488079
NCBI-ProteinID: XP_006164437
Position
Un
AA seq 725 aa
MNQPDDPDPSPEPLCVVCGQVHSPEENHFYTYKEDVDDDLICHICLQALLDPLDTPCGHT
YCTLCLTNFLVEKDFCPVDRKPLVLQHCKKSSILVSKLLNKLLVTCPFTEHCSAVLQRCD
LEQHFQTSCKGASHYGLTKDKKRRSQDGCPDGCASLTATALSPEVTAAATISLMTDEPGL
DNPAYVSTAEDGPPANSPSDSSRSNRPRTRPFERSSIRSRSFKKINRALSVLRRTKSGSA
VANQADQGREHSENTTVPEVFPRLYHLIPDGEITSIKINRVDPSESLSIRLVGGSETPLV
HIIIQHIYRDGVIARDGRLLPGDVILKVNGMDISNVPHNYALRLLRQPCRALRLTVLRER
KLGGRSGQALDTYGPRDDSFHVILNKSSPEEQLGIKLVRRVDEPGVFVFNVLDGGVADRQ
GQLEENDRVLAINGHDLRYGSPESAAHLIQASERRVHLVVSRQVQLQGPDIFQENGDHGH
SPGPGQRSSTPKLLHPAATCHEKVVSIRKDPSESLGMTVAGGASHREWDLPIYVISVEPG
GVISRDGRIKTGDILLNVNGTELTEVSRSEAVALLKSTSSSVVLRALEVREHEPQEDHSS
PEGLDSNHNAAPPSDWSPSWVMWLELPQYLCDCKDVVLRRNTAGSLGFCIVGGYEEYNGN
QPFFIKSIVEGTPAYNDGRIRCGDILLAVNGRSTSGMIHACLARMLKELKGRITLTIVSW
PGTFL
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgaaccagccagatgaccccgaccccagccccgagcctctgtgcgtggtgtgcggccaa
gtccactcccccgaggaaaaccacttctacacgtacaaggaagacgtggacgacgacctc
atatgccacatctgcctgcaggccctactggaccccctggacaccccatgtggccacacc
tactgcaccctgtgcctcaccaacttcctggtggagaaggacttctgcccggtcgaccgc
aagcctctggtcctgcagcactgcaagaagtccagcatcctggtcagcaagctcctcaac
aagctgctggtgacctgccctttcacggagcactgctctgcggtgctgcagcgctgtgac
ctcgagcagcacttccaaaccagctgtaaaggggcctcgcactatggcctgaccaaagac
aagaagagacgctcacaagatggctgcccagacggctgtgcgagcctcacagcaacagca
ctgtctccagaggttacagccgccgccaccatctccttaatgacagacgagcccggcctc
gacaaccctgcctacgtgtccacggcggaggacggtccaccagcaaacagcccgtccgac
tccagccggagcaaccgaccaaggacacgaccctttgagcgatcctcaatcagaagcaga
tcttttaaaaaaataaaccgggctttgagtgttcttcgaaggaccaagagtggaagtgca
gttgcaaaccaagctgaccagggcagggaacactccgaaaataccacagtccctgaagtc
tttccaagattgtatcacctgattccagatggtgaaattaccagcatcaagatcaatcga
gtggatcccagtgagagcctctccattaggctcgtgggaggcagtgagaccccactggtc
catatcattatccagcacatttaccgggacggggtgattgccagagatggccggctattg
ccaggagacgtcattctgaaggtcaacgggatggacatcagcaacgtcccgcacaactac
gcgctgcgcctgctgcggcagccctgccgggcgctgcggctgaccgtgctgcgcgagcgg
aagctgggcggcaggagcggacaggctctggacacctacgggccccgcgacgacagtttc
cacgttatcctcaacaaaagcagccccgaagagcagctgggaataaagctggtgcgcagg
gtggatgagcccggggtgttcgttttcaacgtgctggacggcggcgtggcggaccgacag
ggccagctggaggagaacgaccgggtgctggccatcaacgggcacgaccttcgatacggc
agtccagagagtgcggctcatctgattcaggccagcgagaggcgtgttcacctcgtcgtg
tcccgccaggttcaactgcagggccctgacatcttccaggaaaacggtgaccacggccac
tctccagggccaggccagaggagcagcactcccaagctcctccatcctgcagctacctgc
cacgagaaggtggtaagtatccgaaaagaccccagcgaatctctcggcatgaccgttgca
gggggagcatcgcacagagaatgggatttgcccatctacgtcatcagtgtcgagcctgga
ggagtcataagcagagacgggagaataaaaacaggtgacattctgttgaacgtgaatggg
accgagctaaccgaagtcagccggagcgaggcggtcgcactgctgaagagcacgtcctcc
tcggtggtactcagagctctggaagtcagagaacacgagccccaggaagaccacagcagc
ccggagggcctggactccaaccacaacgcggccccgcctagcgactggtccccgtcctgg
gtcatgtggctagagttaccacagtacctgtgtgactgcaaggatgtggtactgcgaaga
aacacagctggcagcctgggcttctgcattgtgggaggttacgaggagtacaatgggaac
cagcctttttttatcaagtccattgttgaaggaacaccagcatacaatgatgggaggatc
agatgtggcgatattctccttgctgtcaatggtcggagtacgtcaggaatgatacatgcc
tgcttggcaaggatgctcaaggaactgaaaggaagaattactctcactattgtctcttgg
cctggcacttttttatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (12)   
   Pfam (12)   
All databases (45)   

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