ID A0A0E0NKP1_ORYRU Unreviewed; 1316 AA.
AC A0A0E0NKP1;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
OS Oryza rufipogon (Brownbeard rice) (Asian wild rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4529 {ECO:0000313|EnsemblPlants:ORUFI02G33420.1, ECO:0000313|Proteomes:UP000008022};
RN [1] {ECO:0000313|Proteomes:UP000008022}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. W1943 {ECO:0000313|Proteomes:UP000008022};
RA Zhao Q.;
RL Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ORUFI02G33420.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC Evidence={ECO:0000256|ARBA:ARBA00001556};
CC -!- SIMILARITY: Belongs to the DEAD box helicase family. DEAH subfamily.
CC {ECO:0000256|ARBA:ARBA00008792}.
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DR EnsemblPlants; ORUFI02G33420.1; ORUFI02G33420.1; ORUFI02G33420.
DR Gramene; ORUFI02G33420.1; ORUFI02G33420.1; ORUFI02G33420.
DR HOGENOM; CLU_001832_0_0_1; -.
DR Proteomes; UP000008022; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR CDD; cd17982; DEXHc_DHX37; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF99; ATP-DEPENDENT RNA HELICASE DHX37-RELATED; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000008022}.
FT DOMAIN 354..546
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 685..893
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 23..53
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 69..94
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 116..140
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 611..687
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 959..979
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 29..46
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 118..140
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 611..651
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 673..687
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 963..979
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1316 AA; 146968 MW; 686382247EE06183 CRC64;
MSLGFYGPFS FGPLGVTNKP GPNWIPSTLR LGPSPPPPPL PSLPPPRAAG SATAAAAYRL
LSAGATARSS ELALEGGRSP ISPRGPAPPA CPLADAADVG EHQAYKDSNA LILPCKRKNK
GQGKDKDGKK IKEDPKMSKS KLKKLQKLEE EKQKKLLQAQ SIEILRKHKI SDDAYSLLHA
SGTIGQAETL KEKRRRAVQF SKAGLNVPEE LSLFKKDGDQ KASENSEAAE EVCLDKIVDS
AKNEDPQRKC NNHINNVAMK PVECKLVIDV GLSDQEPKTE GSDGVPNISA NQAIQSCVPS
CSGEEILQDK EPGQEERTVQ ECFNPPIVVP VSRPHEVEKT RRDLPIIMME QEIMEAIYEN
SVVILCGETG CGKTTQVPQF LYEAGFGTSN RSDRKGIIGI TQPRRVAVLA TARRVSYELG
LKLGKEVGFQ VRHDKMVGSK CSIKFMTDGI LLREVQSDFL LKRYSVIILD EAHERSLNTD
ILIGMLSRII KIRKSLYIEQ QEKIRCGLSI NPEDKISQLK VVLMSATLQL KDFISNRRLF
DVIPPAIKVP VRQFPVTVHF SKSTHDDYLG QAYKKVMSIH KKLPQGGILV FVTGQREVDY
LCKKLQRASK QQTDKKTEKV EGDENGSSQE VVEREISEAY DIDRDESEHQ DDMFSQYDED
ESNAGPSVDS SDIEMEPEMD TDSEDDDSVV YETTEEDGPV LAFLKGAEGS SGLKASFKAI
SRVSGEPEST DVPSNATILE ESSHVPCTSK CTEPRSVSHG KLRVLPLYAM LPASQQLRVF
QDIPDGERLV VVATNVAETS LTIPGIKYVV DTGKQKVKNY NHATGTSSYE IQWISKASAS
QRSGRAGRTG PGHCYRLYSA AAYGKDELFP EFSEPEIKNI PVDGVVLMLK FMNINKVENF
PFPTPPDKES LVEAERCLKV LEALDSKGEP TSMGKAMAQY PMSPRHSRLL LTINEFCGES
NQDNPDSEDK DRQERKRQKK LKAMIREAHT KFSNPSSDAL SISRALQLFE LSENPVEFCR
VNSLHLKTME EMSKLRKQLL RLIFHHSKFC EEFSWKFGVS EDVEEAWRHE SDKKPMQLNE
EELLGQGICA GWADRVAKRI RAFPGPSKDD KKVRAVHYQS CALNDTIYLH RSSSVARIAP
EFVVYSELLH TKRSYMHGVT SVKPGWILKY ASSLCTFSAP LEDPKPYYEP QKDQVYCYVF
ACALLKGDVL PCLKVIQKFL ALSPSVLLGP VSQRRVGDLL DRMKIGSKLI DSRAALRDVW
NVNPDFLYPE IKAWIQDKFH SQFGAIWEQM HKEVVLEGDE LFPKRYKKVK ETNTTE
//
