ID A0A2K3N8U1_TRIPR Unreviewed; 637 AA.
AC A0A2K3N8U1;
DT 28-MAR-2018, integrated into UniProtKB/TrEMBL.
DT 28-MAR-2018, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
GN ORFNames=L195_g022717 {ECO:0000313|EMBL:PNX99452.1};
OS Trifolium pratense (Red clover).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium.
OX NCBI_TaxID=57577 {ECO:0000313|EMBL:PNX99452.1, ECO:0000313|Proteomes:UP000236291};
RN [1] {ECO:0000313|EMBL:PNX99452.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNX99452.1};
RX PubMed=24500806; DOI=10.3732/ajb.1300340;
RA Istvanek J., Jaros M., Krenek A., Repkova J.;
RT "Genome assembly and annotation for red clover (Trifolium pratense;
RT Fabaceae).";
RL Am. J. Bot. 101:327-337(2014).
RN [2] {ECO:0000313|EMBL:PNX99452.1, ECO:0000313|Proteomes:UP000236291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tatra {ECO:0000313|Proteomes:UP000236291};
RC TISSUE=Young leaves {ECO:0000313|EMBL:PNX99452.1};
RX PubMed=28382043; DOI=10.3389/fpls.2017.00367;
RA Istvanek J., Dluhosova J., Dluhos P., Patkova L., Nedelnik J., Repkova J.;
RT "Gene Classification and Mining of Molecular Markers Useful in Red Clover
RT (Trifolium pratense) Breeding.";
RL Front. Plant Sci. 8:367-367(2017).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC Evidence={ECO:0000256|ARBA:ARBA00001556};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PNX99452.1}.
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DR EMBL; ASHM01017776; PNX99452.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2K3N8U1; -.
DR STRING; 57577.A0A2K3N8U1; -.
DR Proteomes; UP000236291; Unassembled WGS sequence.
DR ExpressionAtlas; A0A2K3N8U1; baseline.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR048333; HA2_WH.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF109; ATP-DEPENDENT RNA HELICASE DHX15 HOMOLOG; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF04408; HA2_N; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000313|EMBL:PNX99452.1};
KW Helicase {ECO:0000313|EMBL:PNX99452.1};
KW Hydrolase {ECO:0000313|EMBL:PNX99452.1};
KW Nucleotide-binding {ECO:0000313|EMBL:PNX99452.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000236291}.
FT DOMAIN 67..215
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 240..420
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 637 AA; 71840 MW; 67FB7F0BCF4953CD CRC64;
MVLMMGTERK RKLSLFDDSA AATAKMVKTN GNNLINHWNG KPYSARYYDI FDKRKTLPVW
QQKDDFLQVF KDNQTLILVG ETGSGKTTQI PQFVLEAVDL ETPDKRGKKM MIACTQPRRM
AAMSVSRRVA EEMDVTIGEQ VGYSVRFEDC SSARTVLKYL TDGMLLREAM TDPLLERYKE
VLKKRPDLKL VVMSATIDAE KFQGYFVGAP LMKVPGRLHP VEIFYTEEPE RDYFEAAVRT
VVQIHMCEPA GDILVFLTGE EEIEDACCKI SKEVANLGDQ VGPVKVVPLY STLPPAMQQR
IFEPAPPPVK DGGPTGRKIV VSTNIAETSL TIDGIVYVID PGFAKQKVYN PRVCGESLLV
SPISKASAHQ RSGRAGRTQP GKCFRLYTER SFNNDLKPQT DPEILRTNLA NIVLTLKKLG
IDDIVHFDFM DPPAVETLSR ALELLNYLGA LDDECNLTKL GEIMSEFPLD PQMSKMLVVS
PEFNCSNEIL SISAMLSVPN CFIRPRQALK AADEAKARFG HIDGDHLTLL NVYHAYKQNN
EDASWCYNNF INNRALKLAD NVRQQLVRIM ARFNLKLCST DFNSRDYYIN IRKSMLAGYF
MQVAHLERTG HYLTVKDNQV WLKLGPIKVV PRMHNGA
//
