ID F6INH6_9SPHN Unreviewed; 828 AA.
AC F6INH6;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 61.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
GN ORFNames=PP1Y_AT21038 {ECO:0000313|EMBL:CCA92978.1};
OS Novosphingobium sp. PP1Y.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=702113 {ECO:0000313|EMBL:CCA92978.1, ECO:0000313|Proteomes:UP000009242};
RN [1] {ECO:0000313|EMBL:CCA92978.1, ECO:0000313|Proteomes:UP000009242}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=sp. PP1Y {ECO:0000313|Proteomes:UP000009242};
RX PubMed=21685292; DOI=10.1128/JB.05349-11;
RA D'Argenio V., Petrillo M., Cantiello P., Naso B., Cozzuto L., Notomista E.,
RA Paolella G., Di Donato A., Salvatore F.;
RT "De novo sequencing and assembly of the whole genome of Novosphingobium sp.
RT strain PP1Y.";
RL J. Bacteriol. 193:4296-4296(2011).
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DR EMBL; FR856862; CCA92978.1; -; Genomic_DNA.
DR RefSeq; WP_013833283.1; NC_015580.1.
DR AlphaFoldDB; F6INH6; -.
DR KEGG; npp:PP1Y_AT21038; -.
DR eggNOG; COG1643; Bacteria.
DR HOGENOM; CLU_001832_5_6_5; -.
DR OrthoDB; 9805617at2; -.
DR Proteomes; UP000009242; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd17990; DEXHc_HrpB; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR InterPro; IPR048333; HA2_WH.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR010225; HrpB.
DR InterPro; IPR049614; HrpB_DEXH.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR013689; RNA_helicase_ATP-dep_HrpB_C.
DR NCBIfam; TIGR01970; DEAH_box_HrpB; 1.
DR PANTHER; PTHR43519; ATP-DEPENDENT RNA HELICASE HRPB; 1.
DR PANTHER; PTHR43519:SF1; ATP-DEPENDENT RNA HELICASE HRPB; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF04408; HA2_N; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF08482; HrpB_C; 1.
DR PIRSF; PIRSF005496; ATP_hel_hrpB; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:CCA92978.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000009242}.
FT DOMAIN 14..177
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 200..368
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 800..828
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 828 AA; 89467 MW; 3E14C71BA13277B7 CRC64;
MTTLPIHTVL PDLLQALRDR TACVLIAPPG AGKTTAVAPA LLGEPWCDGT VILLSPRRVA
ARASAERMAE MLGEKAGETI GYVTRLDTKR SGKTRVLVMT EAIFVASILS DPELPGVSAV
LFDEAHERHL DSDLGLALSL ETREVLRDDL RVVVMSATID GTRFARLLGS DAPLIESEGK
SWPLTIRWFG ASPDLRIEDA VTSAILAAWR EEDGDILAFL PGVREIDRAA ERLAEKLPAA
LVLPLHGQCE PAAQRTAIRR DPQGRRRVVL STAIAETSLT LDGVSVVVDC GLSRRAEFDK
AAGVTRLVTH RASRASAAQR AGRAARQQPG TAYRLWEEAG HAGRPEFDPP EMLTSDLAPL
TLSLAQWGAG DPAAMAWLDP PPPPALDAAR GQLAALGALD AEGRITPFGR EMASLPLDPA
QAAMVLRAAD FGAENVAARL ALLLQERGLG GRSEDLAQRL ARWESDRSAR AQASRRLADG
WSRRASALVK ARRDDGAQDV AKDTAGGDVP VGALLALGRP DMVARRRDAS GETWLSAGGR
GYILDPTSPL ASRDWMVIGD AQGQAKGARI LSGASLEPSE VETWLAERIE RRSILRWNEA
EGRVEARQQR RLGAITLASG PDPSPDPGAI AAFLLDRVRE KGLALVPFGK SSLSLLRRAR
FAGLSALGEE AMLADLDTWL GPLVGRRLDA IDKGALHAAL LGRLTWDDQQ VLERLAPAEF
RSPAGSSHAI DYEDEGGPSV EVRVQGLFGL DSHPTFGQPP QPLLLKLTSP AGRPIQTTRD
LPGFWRGSWR DVQRDMKGRY PRHRWPDEPW AEDPSLKTRN AFEASRRR
//
