KEGG   Variovorax paradoxus S110: Vapar_2538
Entry
Vapar_2538        CDS       T00916                                 
Name
(GenBank) AMP-dependent synthetase and ligase
  KO
K18661  malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
Organism
vap  Variovorax paradoxus S110
Pathway
vap00280  Valine, leucine and isoleucine degradation
vap01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vap00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    Vapar_2538
Enzymes [BR:vap01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.76  malonate---CoA ligase
     Vapar_2538
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: ACS19164
UniProt: C5CKL0
Position
1:2679472..2681007
AA seq 511 aa
MKTKANSNLFAALRAAFPAELGRTAVETDNGLFYSWQDLDRASAMMANLFGALGLAEGAR
IAVQVEKSVEAMILYLATLRAGYVFLPLNTAYQSAEIEYFIGNAEPAVVVCTSRNAAWVG
PIASAAGTRHVFTLDDDRTGTLLELAAQCSDRHEAARKNADDLAAILYTSGTTGRSKGAM
LTHGNLLSNAEVLKDYWGWTEGDVLIHALPIFHVHGLFVALHGALLNGSKMIWFSRFDPK
RAVEKLPEATVFMGVPTLYVRLLAEPGLTREAVRGMRLFIAGSAPLLIETFEEWRERTGH
TILERYGMSETIMLTSNPYSPTQGERRGGTVGFALPGVRLRVRDDAGRDCTTDEIGNIQV
SGPNVFAGYWRMPEKTKEEFTADGFFKTGDVGKIDGRGYVTIVGRSKDLIISGGYNVYPA
EIEGYINELPGVAESAVVGVPHPDFGEVGVAIVIAKGNGALDPDAIVAELKSKLANFKIP
KRCFVVPELPRNTMGKVQKALLREQHKGLFG
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgaagacgaaagccaattccaacctgttcgccgccctgcgcgcggcctttcccgccgag
ctcggccgcacggccgtggaaaccgacaacggcctgttctattcgtggcaggacctcgac
cgcgccagcgcgatgatggccaacctgttcggcgcgctggggctcgcggagggcgcccgc
atcgcggtgcaggtcgagaaatcggtcgaggcgatgatcctctacctcgccacgctgcgc
gccggctacgtgttcctgccgctcaacaccgcctaccagagcgccgagatcgaatacttc
atcggcaacgccgagccggccgtggtggtgtgcaccagccgcaatgccgcgtgggtcgga
cccatcgcgagcgcggcgggcacccggcatgtgttcacgctggacgacgaccgcaccggc
acgctgctggagcttgccgcgcaatgcagcgaccggcatgaagcggcgcgcaagaacgcg
gacgacctggccgccatcctctacaccagcggcaccaccggccgcagcaagggcgcgatg
ctcacgcatggcaacctgctgtcgaacgccgaggtgctcaaggactactggggctggacg
gagggcgacgtgctgatccacgcgctgccgatcttccatgtgcacggcctcttcgttgcg
ctccacggtgcgctgctcaacggcagcaagatgatctggttctccaggttcgacccgaag
cgcgcggtcgagaagctgcccgaggccaccgtgttcatgggcgtgcccacgctctatgtg
cgcctgctggccgagcccggcctcacgcgcgaggcggtgcgcggcatgcggctcttcatc
gccggttccgcgccgctgctcatcgagaccttcgaggaatggcgcgagcgcaccggccac
accatcctggagcgctacggcatgagcgaaaccatcatgctcacctccaacccctacagc
cccacacagggcgagcgccgcggcggcaccgtcggctttgcgctgccgggcgtgcggctg
cgcgtgcgcgacgacgccggccgcgactgcaccaccgacgagatcggcaacatccaggtc
agcggcccgaacgtgttcgcgggctactggcgcatgccggagaagacgaaggaagaattc
accgccgatggtttcttcaagaccggcgacgtcggcaagatcgacggccgcggctacgtc
accatcgtcggacgcagcaaggacctgatcatcagcggcggctacaacgtctatcccgcc
gagatcgagggctacatcaacgagctgccgggcgtggccgaaagcgcggtggtcggcgtg
ccccaccccgacttcggcgaggtgggcgtggccatcgtcattgccaagggcaatggggcg
ctcgaccccgatgccatcgtggcggagctcaagtcgaagctcgcgaacttcaagattccc
aagcgctgcttcgtcgtgcccgagctgccgcgcaacaccatgggcaaggtgcagaaggcg
ctgctgcgggagcagcacaaggggttgttcggctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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