KEGG   Vigna angularis (adzuki bean): 108335756
Entry
108335756         CDS       T04660                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108335756
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:var03019]
    108335756
Enzymes [BR:var01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     108335756
Messenger RNA biogenesis [BR:var03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     108335756
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C dsrm DEAD HA2_N AAA_19 AAA_22 nSTAND3 ATPase Dicer_dimer PhoH AAA_11 Rad17 T2SSE
Other DBs
NCBI-GeneID: 108335756
NCBI-ProteinID: XP_017427381
Position
6:16026115..16047608
AA seq 1097 aa
MFPRIPFLAMDSSLPLHVDGADKGFNCDADKGNSSSAFPSEDWKQKLNMLLNDQSKQELV
SREKKDRRDFQQIETLASKMGLYSHMYAKVVVVSKAPLPNYRYDLDDKRRLREVNLPTTL
LRQVDGYLQEYLTQKSRRKENFSDLWCATPADSGGTDEGLFEPPKSLSCSRAVVDKFLCQ
RSSQMRDQQRTWQESPDGRKILEFRSSLPAYKEKEAILSAISRNQVLIISGETGCGKTTQ
VPQFILESEIELVRGAVCNIICTQPRRIAAISVSERVAFERGEKLGETVGYKVRLEGMQG
RDTHLLFCTTGILLRRLLDDKKLKGITHIIVDEIHERGINEDFLLVVLKDLLAFRPELKL
ILMSATLDAELFSSYFNNASTMKIPGFTYPVRTQFLEDILEISGYRLTPDNQIDDYGPER
IWKMNKQLPGKRKSQLSSALEDVLRAADFNYYSPQTSESLSCWNPDFIGFNLIQYILCNI
CEHERPGAILVFMIGWDDINALKEKLLTHPVLSDPNRVLLVMCHGSMDSLEQRLIFQEPE
DGVRKIVLATNIAETSITINDIVFVIDCGKAKESSYDALNNTCCLLPTWISKVSVQQRRG
RAGRVQPGECYHLYPRCVYDSFTEHQLPEILRMPLQSLCLQIKSLKLGSISEFLSRALQS
PEILAVQNAIEYLKTIGALDENENLTILGRHLVVLPMEPKLGKMLIFGVIFNCLDPILTI
VAGLTVRCPFLTPSDKKDLAQAAKSQFSHDYSDHLAIVRAYDSWKDAEIDNAGHEYCWKN
FLSPQSMKVIEALRVEFLSLLKDIGLVDRNMSSCNAWSYDMYLIRAAICYGLYPGICSVV
HKDKSFSLKTTDDGKVLLHSNSVNARESRIPYPWLVFNEKIKVNSVFLRDSTAVPDSVVL
LFGGSISKGDTDGHLKMSGGYLEFFVKPAVAEMYQSIRKDLDRLIHSKLQFPQMSIHSFH
ELLFAIRLLICNEKCEGKFVYSCQLLKPSMMTLQQALVSRTTSGPGGDNTKGQLQTLLTR
AGYGAPFYTTTQLKNNQFRATVEFNGVQIMGQPYSNKKNAEKDAAAEALQWLMGIQTGNE
DINHMTMLLKKRKTDHN
NT seq 3294 nt   +upstreamnt  +downstreamnt
atgttccctcgcattccatttctcgccatggattcttctcttccccttcatgttgacggt
gctgacaaaggttttaattgcgatgctgacaaagggaattcttcgagtgctttccccagc
gaggactggaagcagaaattaaacatgcttttgaatgatcagagtaagcaagagttggtc
tcaagggagaaaaaggatcggcgtgattttcagcaaatagagactttggcgagcaaaatg
gggttgtatagccatatgtatgcgaaggtggttgttgtcagcaaagcccctcttccaaac
tacagatatgatttggacgataaacgccgccttagggaggtgaacctacctactactctg
ttaaggcaagttgatggatatcttcaagaatacctaacccaaaagtcaagaaggaaggaa
aacttttccgatttgtggtgtgcaacaccagccgacagcggtggtacagatgaagggctt
tttgagccacctaagtcactatcatgcagcagggctgtagtggataaatttctttgtcag
agaagttcacaaatgcgtgatcagcaaagaacttggcaggaatctccagatggaagaaag
attctggaatttcgtagcagtctacctgcttataaagagaaggaagcaatattatcagcc
atatcaaggaatcaggtacttatcatttcgggtgaaacaggttgtggaaagacaacacaa
gttccacaatttatcctagaatctgagatagaactagttcgtggagctgtgtgtaatatc
atttgcacacaaccaagacgcattgcagcaatttctgtttctgaaagagttgcctttgaa
agaggagagaaattgggtgaaactgttggatataaagttagacttgaaggcatgcaaggg
agagatacccatcttctcttctgcaccacaggcatcttattaagaagattactagatgat
aaaaaattaaaaggcataactcatattattgttgatgaaattcatgagcggggaattaat
gaagattttttgcttgttgtccttaaagatcttctagctttcaggccagaactgaaactg
attttaatgagtgctacccttgacgctgagctcttctcttcatattttaataatgcttca
actatgaagattccgggttttacctatcctgtcagaactcaatttttggaggatattttg
gaaatctcgggctacagattgactcctgacaatcaaattgatgactatggtccagaaagg
atttggaaaatgaacaaacagttgccaggaaagaggaaaagccaattatcttctgctttg
gaggatgtgttaagagctgctgatttcaattattacagtccgcaaacaagcgagtctttg
tcttgttggaatcctgactttattggttttaacctcatacaatatatactgtgcaatata
tgtgagcatgaaagaccaggtgccattttagttttcatgattggatgggatgatataaat
gctctgaaggagaagctcctaacacatcctgtcttgagtgatccaaaccgagttttgttg
gtgatgtgccatggctcaatggacagtttggagcagaggttaatctttcaagaacctgaa
gatggagtacggaaaatagtgctagcaacaaatattgctgaaacgagtatcacaatcaat
gatattgtttttgttatcgactgtgggaaggcaaaagaatcatcatatgatgcattgaat
aacacatgttgtttgcttcctacttggatttctaaggtttcagttcaacaaagaagagga
agagctggtcgtgttcaaccaggagaatgttatcatctctatcctagatgtgtatatgat
tctttcacagagcatcaattacctgaaattttgagaatgccgttgcaatctctctgtctg
caaatcaaaagtttgaaactaggaagtatatctgagtttttgtctagggctttacagtct
ccagagatacttgcggtgcaaaatgcaattgaatatttgaaaacaattggagctctggat
gagaatgagaatctgactattttagggcgccacctggtagtgcttcctatggaacccaaa
cttggcaagatgctgatatttggtgttatattcaattgtctggatcctatactaacgatt
gttgcaggccttactgttagatgtccttttctaacaccttcagataaaaaagatcttgca
caggcagcaaagtctcagttttcccatgattacagtgaccatcttgccattgtgagggcc
tatgatagctggaaggatgccgaaatagacaatgctggacatgaatactgctggaagaat
tttctttctccacaatccatgaaagttattgaggctcttcgagtggaattcttatccctg
ctcaaagatattggattagttgatagaaacatgagcagttgcaatgcatggagctatgat
atgtatctcattcgagcagctatttgctatggcctatatcctggaatctgctcggttgtg
cataaggataagtcattttctctgaaaacaacggatgatggcaaagttctcctacattcg
aattcagtgaatgctcgcgaatctagaattccatatccatggctagtttttaatgagaag
ataaaagtgaactctgtatttctccgtgactcaacagctgtgcctgattctgtggtactt
ctttttggtgggagcatctcaaaaggagatactgatggtcacttgaaaatgtcgggagga
tatttggagttttttgtgaaacctgctgttgctgaaatgtaccagagtataaggaaagat
cttgacagactcattcacagtaaattacagttcccgcagatgagcatacactcattccat
gagctcttatttgctatacggttgctgatttgtaatgagaaatgtgaaggcaaatttgtg
tatagttgccagctccttaaaccatcaatgatgacattgcaacaagcattggtttcaaga
acaaccagtggacccgggggtgataatactaaaggccagcttcaaacattgctgacccga
gctggatatggtgcccccttctacacaactacgcaattgaagaataatcagtttcgtgct
acagttgagtttaatggagtgcagattatgggccaaccatatagcaacaagaagaatgca
gaaaaggatgctgcggctgaggcactgcagtggcttatgggtatacaaacggggaatgag
gatatcaatcacatgacaatgttgctgaagaaaaggaagacagatcataattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (15)   
   Pfam (15)   
All databases (33)   

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