KEGG   Vibrio cholerae O1 El Tor FJ147: IR04_18150
Entry
IR04_18150        CDS       T03827                                 
Name
(GenBank) Crp/Fnr family transcriptional regulator
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vcf  Vibrio cholerae O1 El Tor FJ147
Pathway
vcf02020  Two-component system
vcf02024  Quorum sensing
vcf05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    IR04_18150
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    IR04_18150
   05111 Biofilm formation - Vibrio cholerae
    IR04_18150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vcf03000]
    IR04_18150
Transcription factors [BR:vcf03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    IR04_18150
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 Crp HTH_23 MarR_2 RepL Exonuc_VII_L MarR HTH_24 Sigma70_r4 HTH_11 HTH_36 HTH_7 HTH_28 HhH-GPD
Other DBs
NCBI-ProteinID: AKA01003
Position
I:2866872..2867504
AA seq 210 aa
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEM
ILSYLNQGDFIGELGLFEEGQERTAWVRAKTPCEVAEISFKKFRQLIQVNPDILMRLSGQ
MARRLQVTSQKVGDLAFLDVTGRIAQTLLNLARQPDAMTHPDGMQIKITRQEIGQIVGCS
RETVGRILKMLEEQNLISAHGKTIVVYGTR
NT seq 633 nt   +upstreamnt  +downstreamnt
atggttctaggtaaacctcaaaccgatccaacactagagtggtttctttcacattgtcac
attcataagtacccatcaaaaagcacactgatccacgcgggtgagaaagcggaaacgctg
tactacatcgtaaaaggttcagttgcggtactgatcaaagatgaagaaggtaaagagatg
attctctcttacctgaaccaaggtgattttatcggtgagcttggcttgtttgaagaaggc
caagagcgtacagcttgggttcgtgctaaaacaccttgtgaagtggctgaaatctcattt
aagaaattccgtcaattgatccaagtaaacccagatatcttgatgcgcctttcaggtcaa
atggctcgtcgtctgcaagtgaccagccagaaagttggcgaccttgcgttcctagacgta
actggccgtatcgcacagactctgctgaatcttgcacgtcagccagatgcgatgactcac
cctgacggtatgcaaatcaagatcactcgccaagagatcggtcaaattgttggctgttct
cgcgaaaccgttggccgcatcctgaagatgctggaagagcagaacctgatctctgcccac
ggtaaaaccatcgtggtttacggcactcgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (24)   

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