KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_79240
Entry
VOLCADRAFT_79240  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K17263  cullin-associated NEDD8-dissociated protein 1
Organism
vcn  Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vcn04121]
    VOLCADRAFT_79240
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vcn04147]
    VOLCADRAFT_79240
Ubiquitin system [BR:vcn04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Multi subunit type E3 associated proteins
    VOLCADRAFT_79240
Exosome [BR:vcn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   VOLCADRAFT_79240
SSDB
Motif
Pfam: TIP120 HEAT_2 MMS19_C DUF3385
Other DBs
NCBI-GeneID: 9618398
NCBI-ProteinID: XP_002946863
JGI: 79240
UniProt: D8TKM3
Position
Unknown
AA seq 1264 aa
MANTTLVIILEKIASKDKDFRYMATSDLLHELQKDTFKADAELEKKLCAVVLNQLEDPSG
DISNLAVSCLGYLARKVAEVRAEDMVRQLCDKVAGAGPASGGSSAASKARDAQREIASIG
LKALIKELAGGAAAGVGANSQLVSSASTIIAGRMLEGLNIHKDDSEVVGHVLDILTELIQ
RFGGLLVSEHCRIRDALLGALGEGRLVMRKKALQGLAALSVFLNDDALESVVTYLLTALQ
APNAKADFVRTYIQAVGQISRAVGYRFGRYLATAVPLAISHCNKATEGDDELREHCLQAL
EGFVLRCPHDTRSQLDAVQAAALRYLRYDPNFAPDDEEGGDEDMGDDDEEADDDGDGDDA
DEYSDDEDMSWKVRRAATRIVSALVSRYPDALPALYRASMSDLVSRFDKEREEGVKADVF
AAVSEMLAQVGATADRYAPGDANSPTALLTGDVASIVRASAKQLRDKSPKTRVGVFGVLR
QLVAVQASSMSGQVDALVPGLLAALNDKSGNTGLKIEALSFLRQTIAATPPSVFQPHTKQ
LAPAVFGCVNERYYKVAAEALRVCEALVGVLRPDPAGPVPPEQASLVAPLYSAIMTRLSA
TDQDQEVKECAISAMAATAARLGDCLQKELPSVLRVLLDRLRNEITRLTAVKALTTLASS
PLVSGELLAGTVEGGSGVASELTSFLRKANRLLRQASLVALEALATRYPAAFEGPVLTAA
VEEAAALVSDADVALASLALRFLVSLTAMPGPAGAAAAAVVVDKVRGPALALVRSPLLQG
AALEVLQSFFAALATAAGPQGGADALLAALLDAGRSAEASSKQAQHSVARCVAALATTSP
AKVPAVVEMLLKSVGAKDSGSQRLALLCLGEIGGRADLSGLPAVAAAATGVLSAPGSSEE
VRAAASHALGGITRGNLHHFMPDLVAQIAAAAGLPKQQYLLLQVREDSLIRHGAGYGLGL
FRASVLSLLFNAAESEEECRNVVAECAGRLALLHPAKVLPALLERTTAASGNIRAVVVSA
VKHAVVDRPHPVDAELGPVLLRFLLLMGDEDRHVRRSAVVALSGCAHAKPGLVVGDLAQL
LPLLYAQTAVREDMIRTVDLGPFKHKIDDGLELRKAAFECLDILNDCCRDRLEPVPFLAA
LESGLGDHADVKMPCHTTLSKLVATDPGAVLAAADRLVVPLEKTLTTRLKSDAVKQEIDR
HEDMLRSCLRCVDALEHVPGSDNNVAFQNFLRKVVLATPALKEKYVAIQRERAEAEGGDA
MDTA
NT seq 3795 nt   +upstreamnt  +downstreamnt
atggcgaacacaactctggttatcattctggaaaagattgctagcaaggataaagatttt
cggtacatggcgacgtcggaccttctgcatgaactccaaaaggacacgtttaaggcagac
gcggagctggaaaagaagctctgcgccgtcgttctcaaccagttagaggatccatcgggc
gacatctcaaacctagcggtcagctgtctcggctaccttgctcgaaaagtagctgaggtc
cgtgctgaagacatggtgcggcagctgtgcgataaggttgcgggcgccgggccggcttca
ggaggcagcagcgccgccagcaaggcgcgggacgctcagcgcgaaattgcttctatcggc
ctcaaggctctcataaaggagctggcggggggagcggctgctggtgtgggcgcaaacagc
cagctcgtcagcagcgcgtccaccatcattgcgggtcgcatgcttgagggcctgaacatc
cataaggacgacagcgaggtggtgggtcacgtgctagatatcctcacagagctcattcag
cgcttcgggggcctgctggtttcggagcactgccgcatccgggacgcactgctgggcgct
ttgggcgaggggcgactggtcatgcgcaagaaggcgcttcagggcctggctgcactgtcc
gtgttcctcaatgatgacgcgctggagagcgtagtgacgtacctactgactgcgcttcag
gcgcccaatgccaaggcggattttgtgcgcacgtacatccaggcggtggggcagatcagc
cgtgccgtgggctaccgcttcggccgctacctcgccaccgctgtgccgctggccatttcc
cactgcaacaaggcgacagagggtgatgacgagctgcgggagcactgcctgcaggctctg
gagggctttgtgctgcgctgcccgcacgacacgcggtcgcagctggatgctgtgcaggcc
gctgcgctgcgctacctgcgctacgaccccaactttgccccggacgacgaggaaggcggt
gatgaggacatgggcgacgacgacgaggaggcagatgacgacggggatggagacgatgct
gacgaatactcggacgacgaagacatgagctggaaggtccgccgtgctgccacccgcatc
gtgtctgcgctggtgtcccgctaccccgacgcgctgccggcgctttaccgcgcgtccatg
tcggatctggtgtcccggtttgacaaggagcgtgaggaaggcgtcaaggcggacgtgttc
gcagccgttagcgagatgctggcgcaggtgggcgccaccgcagatcgctacgcgccggga
gacgccaacagccccaccgcccttctgaccggggacgtggcctccatcgtccgggcatct
gccaagcagctgcgcgataagtcacccaagacacgtgtgggcgtgttcggggtgttgagg
cagctggtggcggtgcaggcgtcgtccatgtcgggtcaggtggacgcgctggtgccgggg
ctgcttgccgctctcaacgacaagagcggcaacacgggtttgaagatcgaggcgctgagc
ttcttgcgtcagaccatcgccgcaaccccgccgtccgtgttccagccgcacaccaagcag
ctggcgcctgctgtgtttggctgtgttaacgagcggtactacaaggtggctgcggaggcg
ctccgagtgtgtgaggcgctggtgggagtcctgcggcccgaccccgccggcccggtgcca
ccagagcaggcatccctagtggcgccgctctactcggcaatcatgactcgcctcagcgct
accgaccaggaccaagaggtaaaagagtgcgcgatcagcgcgatggctgctaccgcggca
cgcttgggcgactgccttcaaaaggagctaccttcggttttgcgggtgctgctagaccgt
ctgcgcaacgagatcacgcgcctcaccgccgtcaaggcgctcaccacgctggcgtcgtcg
ccactggttagcggcgagttgctggcaggcacggtcgaggggggcagtggcgtggcgagc
gagctgacgtccttcctgcgcaaggcaaaccggctcctgcgccaggcgtcgctagtggcg
ctggaggctctggcaactcgctacccggccgcttttgagggtcctgtcctcaccgcagcc
gtagaggaggctgccgcactggtgtcggatgctgacgtggcgctagcgtcgctggcactt
cgcttcctggtgtcgctgacggccatgccgggacccgcgggcgccgcagcagctgcagtg
gtggtggacaaggtgcgcggtccggcactggcactggtgcgcagcccgctgctacaaggg
gccgcgctggaggtgctgcagagcttcttcgcggcgctagccactgccgcggggccgcaa
ggcggggcagatgcgctgctggcggcgctgctcgacgcgggacgcagcgcggaggcgtcg
tccaagcaggcccagcatagtgtggcgcgatgcgtggcagctcttgccaccacgagcccc
gccaaggttcccgctgtcgtggagatgttgctcaaaagcgtgggggccaaggattctgga
tctcagcgcttggcgctgctgtgcctcggcgagatcggcggccgtgctgacctatcaggc
ctgcctgccgtggcagccgctgccacgggggtgctgtccgcgcccggctcttctgaagag
gtccgcgccgccgcctcacacgccctgggaggcattacccgaggcaacctacaccacttc
atgccggaccttgtggcccaaatcgcggcagcggccgggctacccaagcaacagtacctg
ctgctgcaggtccgtgaagacagtttaataaggcacggggctggctacgggctaggcttg
tttcgtgcgagcgtcctatcgctgctcttcaacgctgcggagagtgaggaggaatgccgc
aacgttgtggccgagtgcgcgggccgcctggcactgctgcacccggccaaggtgctgccg
gcgctgctggagcggaccaccgccgcctcgggaaatatacgcgctgtggtggtttcggcg
gtgaagcacgcggtggtggaccggcctcaccccgtggacgccgagctgggacctgtgctg
cttcgcttcctgctgcttatgggcgacgaggaccgccatgtgcgccgctcggcggtggtg
gcgctgtcgggctgcgcacacgccaagccgggcctggtagtgggcgacctggcgcagctg
ctgccactgctgtacgcgcagacggcggtgcgcgaggacatgatccgcactgtggacttg
ggaccttttaagcacaagatcgatgacggtctggagttgcgcaaggcggcgttcgaatgc
ttggacattctcaatgactgctgccgcgatcgtctggaaccggtgcccttcctggcggcg
ctggagagcgggctcggggatcacgcggacgtcaaaatgccctgccacaccacgctgtct
aaactggtggctaccgatccgggtgccgtactggcggcggcggaccggctggtggtgcct
ctggagaagactctcaccacgcgtctcaagagtgatgccgtcaagcaggagatcgaccgg
catgaggacatgctgcgcagctgccttcgctgcgtggacgctctggagcacgtgcccggc
agcgacaacaacgtggccttccagaatttcttgcgcaaggtcgtgctggcgacgcccgct
ctcaaggagaagtatgtggccattcaacgtgagcgtgctgaggcggagggcggcgacgca
atggatacagcgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (54)   

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