KEGG   Variibacter gotjawalensis: GJW-30_1_02382
Entry
GJW-30_1_02382    CDS       T05320                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
vgo  Variibacter gotjawalensis
Pathway
vgo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vgo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GJW-30_1_02382 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vgo03019]
    GJW-30_1_02382 (pnp)
   03016 Transfer RNA biogenesis [BR:vgo03016]
    GJW-30_1_02382 (pnp)
Enzymes [BR:vgo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     GJW-30_1_02382 (pnp)
Messenger RNA biogenesis [BR:vgo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     GJW-30_1_02382 (pnp)
Transfer RNA biogenesis [BR:vgo03016]
 Prokaryotic type
  tRNA degradation factors
   GJW-30_1_02382 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 aRib PCB_OB
Other DBs
NCBI-ProteinID: BAT59847
UniProt: A0A0S3PV74
Position
2449749..2451908
AA seq 719 aa
MFNINKVSLDWGGRQLTLETGKVARQADGAVMVTYGDTTVLCTVVSAKNAKEGVDFLPLT
CNYFEKFYAAGRIPGGFFKREGRPTERETLISRLIDRPIRPLFADGYRCDTQVICTVLSH
DLENDPDIVAMVGASAALTLSGVPFMGPIGAARVAFVDNEYVLNPQLDEANDSALDLVVA
GTTDAVLMVESEAKELSEEIMLGAVMFGHRHFQPVINAIIELAEKAAQEPRDFTAPDFSD
IEKEMLGVVDADLRKAYAIPAKMERHAAVDAAKAKAMAHFNPEGQEPRYDKLKLGKVFKG
LEAKVVRWNILDTGKRIDGRDTKTVRQIISEVGVLPRTHGSALFTRGETQALVVTTLGTG
EDEQFIDALPGTYKEHFMLHYNFPPFSVGETGRLGSPGRREVGHGKLAWRAIHPVLPPKH
EFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLRRPIAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTEKGVTSLQMDIKIAGITEEIMKVALSQAKDGREHILGEMAN
ALTTARSELGEHAPRIEVLQIPVDKIREVIGTGGKVIREIVEKTGAKINVEDDGTVKVAS
ANGDSIKAAINWIKSIASDPEVGTIYEGTVVKVMEFGAFVNFFGAKDGLVHISQLAAARV
QKVSDVVKEGDKVKVKLLGLDDRGKVRLSMKVVDQATGEDLEAKQKAEGQQQPRQAAGE
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgttcaatatcaacaaagtgagcctggattggggtgggcgtcagctgaccctcgagacc
ggcaaagtcgcgcgccaggccgatggcgccgttatggtgacttacggtgacaccacggtg
ctctgcacggtcgtctccgccaagaacgcgaaggaaggcgtcgacttcctgccgctcacc
tgtaactacttcgagaagttttacgccgccggccgcattccgggtggcttcttcaagcgt
gaaggccgcccgaccgagcgtgagacgctcatctcgcgcctgatcgaccgcccgatccgt
ccgctgttcgccgacggttatcgttgcgacacgcaggtcatctgcacggtgctctcgcac
gatctcgaaaacgatccggacatcgtcgcgatggtcggcgcgtccgccgcgctgacgctc
tcgggcgttccgttcatgggtccgatcggcgctgcgcgcgttgccttcgtcgacaacgaa
tacgtgctcaacccgcagctcgacgaagctaacgacagcgcgctcgatctcgtcgtcgcc
ggcaccaccgacgccgtgctgatggttgaatcggaagccaaggagctgtccgaagagatc
atgctcggcgccgtgatgttcggtcaccgccacttccagccggtgatcaatgcgatcatc
gagcttgccgagaaggccgcgcaggagccgcgcgacttcacggctccggacttctcggac
atcgagaaggaaatgctcggcgtcgtcgatgcggacctccgcaaggcttacgcgatcccg
gcgaagatggagcgtcacgctgccgtcgatgccgccaaggcaaaggccatggcgcatttc
aatccggaaggccaagagccgcgctacgacaagctcaaactcggcaaggtcttcaagggc
ctcgaagccaaggtcgttcgctggaacatcctcgacaccggcaagcgcatcgacggtcgc
gacaccaagacggtgcgtcagatcatctccgaagtcggagtgctcccgcgcacccacggc
tcggcgctgttcacacgcggtgagacgcaggcgttggtcgtcaccacgctcggcaccggc
gaagacgagcagttcatcgacgcgctgccgggaacgtacaaggagcacttcatgctccac
tacaacttcccgcccttctcggtcggtgagacgggccgcctcggttcgcccggccgccgc
gaagtcggtcacggcaagctcgcttggcgcgcgatccatccggtcctgccgccgaagcac
gaattcccgtacacgctccgcgtcgtctccgagatcaccgagtcgaacggctcgtcctcg
atggcgacggtctgcggaacctcgctggcattgatggacgcgggcgttccgctgcgccgt
ccgatcgccggcatcgcgatgggcctcatcctcgaaggcgagcgcttcgcggttctctcc
gacatcctcggcgacgaagatcatctcggcgacatggacttcaaggtggctggcaccgag
aagggcgtgacctcgctgcagatggacatcaagatcgcgggcatcaccgaagagatcatg
aaggtggcgctctcgcaggcgaaggatgggcgcgagcacatcctcggtgagatggcgaat
gcgctgaccacggcacgctcggagctcggcgaacacgcgccgcgcatcgaagtgctgcag
atcccggtcgacaagatccgtgaagtcatcggcaccggcggcaaggtgatccgcgagatc
gtcgaaaagaccggcgccaagatcaacgtcgaggacgacggcaccgtgaaggtggcgtcc
gccaacggcgactcgatcaaggcagccatcaactggatcaagtcgatcgcgtccgatccg
gaagtcggcacgatctacgaaggcaccgtcgtcaaggtgatggagttcggcgcgttcgtg
aattttttcggcgccaaggacggtctcgtccacatcagccagcttgctgcagcgcgcgtc
cagaaggttagcgatgtcgtcaaggaaggcgacaaggtcaaggtgaagctgctcggtctc
gacgaccgcggcaaggttcgcctctccatgaaggtcgtcgatcaggcgaccggcgaagac
ctcgaagccaagcagaaggccgaaggtcagcagcagccgcgtcaggctgccggcgagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (38)   

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