KEGG   Vibrio campbellii ATCC BAA-1116: VIBHAR_03166
Entry
VIBHAR_03166      CDS       T00589                                 
Name
(GenBank) hypothetical protein
  KO
K10941  sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
vha  Vibrio campbellii ATCC BAA-1116
Pathway
vha02020  Two-component system
vha02040  Flagellar assembly
vha05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vha00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VIBHAR_03166
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VIBHAR_03166
  09142 Cell motility
   02040 Flagellar assembly
    VIBHAR_03166
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vha03000]
    VIBHAR_03166
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:vha02035]
    VIBHAR_03166
Transcription factors [BR:vha03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    VIBHAR_03166
Bacterial motility proteins [BR:vha02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    VIBHAR_03166
SSDB
Motif
Pfam: Sigma54_activat FleQ Sigma54_activ_2 HTH_8 AAA_5 AAA_16 HTH_50 bpMoxR AAA AAA_7 nSTAND3
Other DBs
NCBI-ProteinID: ABU72115
UniProt: A7MS17
Position
I:complement(3195501..3196967)
AA seq 488 aa
MQGLAKLLVIDDDAPSRLNISNILEFVGESCEAVSSDQLGDVDWSAVWSGFIVGNISAGH
AATAVMAHLNEAYHIPLLVMGSFPLPVDDLPNFVGELEQPLNYPQLSEALSHCKDFLGRK
GVNVVASARKNTLFRSLLGQSRGIQEVRHLIEQVSGTEANVLILGESGTGKEVVARNIHY
HSAYRNGPFVPINCGAIPPELLESELFGHEKGAFTGALTSRKGRFELAEGGTIFLDEIGD
MPMSMQVKLLRVLQERCFERVGGNTTIKVNVRVVAATHRDLETMIDDGTFREDLFYRLNV
FPIEMPALKARKQDIPLLLQELMTRLEAEGGQPICFTPRAINSLMEHNWPGNVRELANLV
ERMIILYPNSLVDVNHLPTKYRYSDIPEFQPEGNPFISVEEQERDVFQDIFSENFSFEDQ
SDLDHNMNAPQALPPEGVNLKELLADMEVNMISQALEAQGGVVARAADMLGMRRTTLVEK
MRKYNLQR
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgcaaggtttggcaaagctgcttgtaatcgatgacgatgcaccaagtcgtttgaatata
agcaatatattggaatttgttggagaaagttgcgaagcggtcagttctgatcagctaggc
gatgttgactggtcagccgtttggtcaggcttcattgtcggtaacatctctgcgggtcat
gcagcgacagcggtgatggctcacctcaacgaagcgtaccatatcccacttctcgtcatg
ggctctttcccattgcccgttgatgatttgccaaactttgtcggtgaattagagcaaccg
ctcaactacccgcaacttagcgaagcgttaagtcactgcaaagacttccttggacgtaaa
ggcgtaaacgtggtagcaagcgcacgcaaaaacacgcttttccgtagccttttaggccaa
agccgaggcattcaagaagttcgtcatttgatcgaacaagtatcgggcacagaagcaaat
gtgctgatcttgggtgagtctggcacgggtaaagaagtcgtcgcacgtaacattcactac
cattctgcctatcgtaatggtccgtttgtgccaatcaactgtggcgcgatcccaccagag
cttctggaaagtgagctgtttggtcatgagaaaggagcgttcactggtgcgttgacctca
cgtaaaggccgttttgaactagccgaaggtggtacgatcttccttgatgagattggtgat
atgccaatgtcgatgcaagtgaagttgctgcgtgttctgcaggagcgttgttttgaacgc
gtaggtggcaacaccacgatcaaagtaaatgttcgtgttgttgccgcaacgcaccgcgat
ctagaaaccatgatcgacgacggcacgttccgtgaagaccttttctatcgcttgaatgtt
ttcccaattgagatgcctgcgctaaaagcgcgtaagcaagacatccctttgttactgcaa
gagctaatgacgcgtttggaagctgaaggcggacaaccaatttgcttcactcctcgtgcg
attaactcgctgatggaacacaactggccgggtaacgttcgtgaacttgccaaccttgtc
gagcgcatgatcattctctacccaaacagtttggttgatgtaaaccatctgccgacaaag
taccgttacagtgatattcctgagttccaaccagaaggtaacccgtttatttcggttgaa
gaacaagaacgtgacgtgttccaagatatcttctctgagaacttcagttttgaagatcaa
agcgatctggaccacaacatgaatgctcctcaagcgctaccgccagaaggtgtgaacttg
aaagagcttctagccgatatggaagtcaacatgatcagccaagcgttagaagcgcaaggt
ggtgtggtagcaagagctgcagatatgctagggatgcgacgcacaacactggttgaaaaa
atgcgtaagtacaaccttcaacgctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system