KEGG   Vibrio neocaledonicus: D3H41_11590
Entry
D3H41_11590       CDS       T06228                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
vnl  Vibrio neocaledonicus
Pathway
vnl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vnl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    D3H41_11590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vnl03400]
    D3H41_11590
Enzymes [BR:vnl01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     D3H41_11590
DNA repair and recombination proteins [BR:vnl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     D3H41_11590
 Prokaryotic type
     D3H41_11590
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH
Other DBs
NCBI-ProteinID: QCO86673
Position
1:2335086..2335727
AA seq 213 aa
MNKIKRIEILERLRENNPNPQTELNWSSPFELLIAVLLSAQATDVSVNKATDKLFPVANT
PQSILDLGVDGLKEYIKTIGLFNSKAENTIKTCKILLEKHNGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKTVDDVEQKLLKVVPKEFKLDVHHWLI
LHGRYTCVARKPRCGSCIIEDLCEYKEKVYPDS
NT seq 642 nt   +upstreamnt  +downstreamnt
atgaacaaaataaaaagaatcgaaattcttgagcgattacgagaaaacaatccgaatcct
caaactgagcttaactggagctccccttttgagctgctaatcgctgtattactatcagct
caagcaaccgatgtaagcgtcaataaagccaccgacaagcttttccctgtagcgaataca
cctcaaagcattcttgatttgggagtcgatggcttaaaagaatacataaagaccatcggt
ttgtttaactcaaaggcagaaaacacaatcaagacttgtaagatcttgttggaaaaacac
aatggtgaagttcctgaagatcgtgcagcgttagaagcgctgccaggcgtaggtcgcaag
accgcaaacgtcgtgctcaacaccgcttttggttggccaactattgccgtcgatacacac
atttatcgcgtgtcgaatcgcactaaatttgcgatgggaaaaacggttgatgatgtcgag
cagaagctattaaaagttgtgccaaaagagttcaaactcgatgtgcaccactggctcatt
cttcatggtcgttatacgtgcgtagcaagaaagcctcgctgcggtagctgcattatcgaa
gatttgtgcgaatataaagagaaagtatacccagatagctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system