KEGG   Vanderwaltozyma polyspora: Kpol_1032p7
Entry
Kpol_1032p7       CDS       T01049                                 
Name
(RefSeq) hypothetical protein
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
vpo  Vanderwaltozyma polyspora
Pathway
vpo03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:vpo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Kpol_1032p7
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpo03400]
    Kpol_1032p7
Enzymes [BR:vpo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Kpol_1032p7
DNA repair and recombination proteins [BR:vpo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     Kpol_1032p7
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT_2 BRCT RNA_ligase
Other DBs
NCBI-GeneID: 5546698
NCBI-ProteinID: XP_001646273
UniProt: A7TGW3
AA seq 965 aa
MRNPTPILVSTNTNTNATFTSKADTNDIEEPHNFSPSPDFKWLCDELFVKLDQIQFRPKE
LNGSKPKYIEYYDIINNFIDIWRRTVGNDIYPALILTIPYRDRRMYNIKESKLIRIVCDY
LKLPKNSETERRLMRWKHRADRNVRLSTFCVEEIKKRKGEPREKIKITIDKLNECLDNLV
LERGYKGSKSQKISESETFKFCFENMTYVELKYFFDILLKDKIVGGLEHKFLNCWHPDAQ
DYLSVVSDLKIVSSKLWNPEFRLKYDDLTINIDHAFTPETAKRLTYSYDTIARRLKNDFF
IEEKMDGERIQLHYMNYGAKLKFLSRRGLDYSYLYGDNRNNGAIGRYLNFHKDVKECILD
GEMVTYDSVKNCILPFGLVKSSAMQSLSVSDIEPDGYHPLYMAFDLVYLNGSSLSTLPLH
QRKNYLDKLLIPCPDFVEILPALHCNDSSLIKSSLEKAIELGSEGIILKRFDSQYLVAKR
SDDWIKIKPEYLEQFGENMDLIVIGRDPGKKDSLMCGLILTGDNEPEEITSLDSNPTDTA
ESFLKPDKRKIISFCNIANGISQKEFRDIDRYTFGHWIKFDDELPPQDLFEFGTKHPIEW
IYPEHSVVLEIKARSLETNESARIKYGTGSTLFGGYCRQIRYDKDWVSCFTYNEFMESRN
LKNALVNYPDNKNLIGRKKRPKKRMFNSLTEIFENTKDAPDESNVIFRGLHFYVISDYID
ETDGSRLSKSDLCNLVLEHNGKLVHNPISRIDILNRLRIISMKYTRETTSLIERGYDIIH
PQWILDCISNRKLVRLLPSHCFNVSSSLMEVTKTRVDRYGDSYETSLTEKDFEILINRQV
LKSESADKRITEGENHLKIPILLFCNRRFFIPETLPSTPIYELKSKVELYGGKLVNKISD
CNVIVFTNTHTENRKEVMKKIRRALVCLDPNSMQVPVLPRIVDANWIDACISECVQVPEE
DYPAV
NT seq 2898 nt   +upstreamnt  +downstreamnt
atgagaaatccaactccaattcttgtcagtaccaataccaacaccaatgccacttttact
tcaaaagctgatactaatgatatagaagaacctcataatttttcaccttcaccagacttc
aaatggttatgcgatgagttatttgtaaagttagatcaaatacagtttcgaccaaaggaa
ctgaatggttcaaaacccaaatatatcgaatattatgatattattaacaatttcattgat
atatggagaagaacagtcggaaatgatatatatccagcactaattttaacaattccatat
agagatagacgaatgtataatatcaaagaatccaagctaataagaattgtttgtgattat
ttgaaattgccaaagaattccgaaacagaaagaagattaatgaggtggaaacatagagct
gatagaaatgtaagattatctacattctgtgtggaagagattaaaaagaggaaaggtgag
ccaagagagaagattaaaataacaatcgataaattaaacgaatgtcttgacaatttggtt
ctcgaaagaggttataaaggttcaaagtcacaaaagatttcagagtcagaaactttcaaa
ttttgctttgaaaatatgacttatgttgaattaaaatatttttttgatatattattgaaa
gataaaatagtaggcggtctagaacacaaatttctaaattgttggcatcctgatgcccag
gattacttaagtgtcgtgtctgatcttaaaatagtctcttcaaaattatggaatcctgaa
tttcgattgaagtatgatgacttgactataaatatcgatcatgcttttacacctgaaaca
gcaaagagactaacatattcatatgataccattgcaagaagattaaaaaatgattttttt
attgaagaaaaaatggatggagaaagaattcaattgcactacatgaactatggagcaaaa
ttgaaatttcttagtagaagaggtttggattatagttacctatatggggataacagaaat
aatggtgccattgggagatacttaaactttcataaagatgtcaaggaatgcatccttgat
ggtgaaatggtaacttacgattctgtaaaaaattgtattcttccattcggtttagttaaa
agtagtgcaatgcagtcactttctgtttccgatatcgaaccggatgggtaccatccattg
tatatggcatttgatttggtatatctaaatggttcttctctttcaacacttccgcttcat
caaaggaaaaactatcttgataaactattaataccctgtcctgattttgtagaaatcctt
ccagctctacattgtaatgacagttcactgatcaaatcatccctggaaaaagcgattgag
ctaggatctgagggaataatcttaaagcgctttgattcacaatatttagttgcaaagaga
agtgacgattggattaagattaaaccagaatatctagaacaatttggagaaaatatggat
ttaatagtgataggtagagatccagggaaaaaggattcccttatgtgtggcctaatactt
actggcgataatgagccagaagagatcaccagcttagattctaatccaactgataccgca
gaatcttttttgaaacctgataaaagaaagattatttcattctgcaatattgccaatggc
atatctcaaaaagaatttagagatatcgacagatatacatttggtcattggataaagttt
gatgatgaactacctccacaagacctctttgagtttggaaccaagcatccgatagaatgg
atatatccggagcattcggtagttcttgagatcaaggcgcgttcattagagacaaatgaa
tcggcaagaataaaatacggtactggtagcaccttatttggagggtactgccgacagatt
agatacgataaggactgggtttcttgtttcacttataacgagtttatggaatcaagaaat
cttaaaaatgcgcttgtaaattatcctgataataagaatctaattggaaggaaaaaacgt
ccaaaaaaacgtatgtttaattcccttactgagatttttgagaatacgaaagatgcgcca
gatgaatcaaatgttatttttaggggacttcatttttatgtaatatctgactatattgat
gaaactgacggttctagactatcaaaaagtgacttatgcaatttagtattagagcataat
ggaaaattagtgcacaatccaatatccagaattgacattcttaatagactgaggataata
tcaatgaagtatactagagaaactacgtcattaatagagagaggatatgatattattcac
cctcaatggattttagattgtatctccaacagaaaattggtacggcttctaccatcacat
tgttttaatgtatcatcgtccttaatggaagttacgaaaactagggtagatagatatggc
gatagctatgaaacctccttaacagaaaaagattttgaaattttaattaataggcaggta
ttgaaaagtgaaagtgcagacaagcgcattactgaaggtgaaaaccatttgaaaattcca
attttacttttctgtaataggcgattttttattccagaaaccttaccttcaactcccata
tatgagcttaaatcaaaagttgaactttatggggggaaacttgtcaataagatatctgac
tgtaatgtaatagtatttacaaacacacacactgaaaataggaaagaggttatgaagaaa
attaggagggccttggtttgcttagatcctaattcgatgcaagtccctgtgttgcccaga
attgtggacgcaaattggatcgatgcctgtatttcagaatgtgttcaagttcccgaagaa
gattatcctgctgtataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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