KEGG   Vigna radiata (mung bean): 106762208
Entry
106762208         CDS       T04126                                 
Name
(RefSeq) endoribonuclease Dicer homolog 3a isoform X1
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
vra  Vigna radiata (mung bean)
Brite
KEGG Orthology (KO) [BR:vra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vra03036]
    106762208
Chromosome and associated proteins [BR:vra03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    106762208
   microRNA pathway
    RISC loading complex
     106762208
SSDB
Motif
Pfam: Ribonuclease_3 Dicer_dimer Ribonucleas_3_3 DEAD ResIII Helicase_C PAZ dsrm SWI2_SNF2 DND1_DSRM SNF2-rel_dom AAA_22
Other DBs
NCBI-GeneID: 106762208
NCBI-ProteinID: XP_014501466
UniProt: A0A1S3U643
Position
5:complement(20216875..20238858)
AA seq 1669 aa
MNFNHDSSDHNQNQSKKRKQPDVDNYTSLELSTSNMNPRSYQIEVFEVARRRNTIAVLDT
GSGKTLIAVMIMKEVGQTIKSLGMKKLIVFLAPTVHLVNQQFNNIRYLTDFQVEEYYGAK
GVDTWTLKTWEQEISTNDVLVMTPQILLDALRKAFMRMEMICLIVIDECHRATGNHPYTK
IMKEFYHQAKEKPKIFGMTASPVGKRGVSSTTDCEVQISELESILDSQRYTVEDRAEMSR
YILSAKESCRFHDQARFSALSLKPKIEALWSKFDALLSENKSNYMDVENKFKTLSQRMSN
ELGKILHCLEDLGILCAYEAVKICHENFSKTEGTCETYRTGYLQCITFVEEVIKLIEESL
HCDDKNILGVDFDYSKAEDMGHISPKLLELIKIFQSLGESSQVSCLIFVDRIITAKVIER
FAKKVPQISHFSVSYLTGNSTSVDAVAPKRQKEILESFRSGKVNLLFTTDVLEEGIHVPN
CSCVIRFDLPKTVRSYVQSRGRSRQANSQFVVMLERGNLKQRNQLFDIIRSERSMTDASI
HKDRESNLRVFTVGKTDTYYVDSTGACVTLDSSVNLIHRYCGTLPQDQYSSAKPTYVSLP
VEGGYQCKLTLPSNSVLQTIIGPLGKDIRLARHLACFEACKKLHQMGALNEHLVPFIEDV
SEDDHIVKNKESSSGAGTTKRKELHGTANICALSGAWGDKLDVEARFFAYKLEFTCSIVS
EIYSGFVLLVESKLDDDVGNIESDLYLVSKVVKASVSSCGQVDLDAKQMMKAKCFHELFF
NGLFGRLVFRSKSAGGETEFLLQKDTKSLWRAKHLYLLLPLEKLNGICEGALQINWHGID
SCASAIEFLRRRYSLVTGDCDDNGIVKSPQDTSSVEMEYVGTNKIHFANCVLDADNIKNT
LVLAIHTGKIYCIIDIDSNLFPESSFCGNNEKSKEHVTYSDYFSKRYGITLRHPRQALLL
LKQSHNPHNLLFNFHEEDARDKSSQIGSTTSKVPAHVHLPPELLYVLEFKRNVLRSFYLL
PSLMYRIESLMLSSQLREEIDGQTSKSNINSSLILEALTTLRCSESFSMERLELLGDSVL
KYVVSCHLFLKYPKKHEGQLSAKRSLAVCNSTLHKLAIERKLQGYIRDSAFEPQRWVAPG
QRSIHPVCCDCGLETLEVPLDVKFHTEDPKVVVGKFCDRGHRWMCSKTISDCVEALIGAY
YVGGGLFASLNVMKWLGIEAELELSLVDEAITAASLHTCMPKESEIAILEKKIGYEFSVK
GLLLEAITHLSEKELGIGCCYERLEFLGDSVLDLLITWHLYKSHTDIDPGVLTDLRSASV
NNDNFAQVAVRHNLHQHLLHGSGLLLSQISEYVKAISESDPRSLPSIRAPKALGDLVESI
VGAMLIDSKLGLDRVWEVFCPLLSPIVTPEKLELPPFRELNELCDSLGYCIKVNENCEKK
GSMMQVEVSVQLPNDLLVREGKGPNKKTAKGEASFHLLKDLEKRGISYCNFMSKGKRDNS
VHINDSPHLKMDSSACFTLNEEHSSELHKRNRFDKTNPTESILPLKYSSGDDFGFSAPIP
VKLSIKTKKGGPRTTLFEVCKKLQWPVPAFDSTEYKDRSLFESCEALQGSKGLNCFVSKV
TLCIPKYGNIECQGEARSDKKSSFDSAAVKMLLELQKLGKVEIDPPLSS
NT seq 5010 nt   +upstreamnt  +downstreamnt
atgaatttcaaccatgattcatcagaccataaccaaaatcaaagtaaaaaacgaaagcaa
cccgatgttgataattatacatccctggaattgtctacttccaacatgaaccccagaagt
tatcagatagaagtgtttgaagttgcacggagaaggaacacaatagccgtgttggataca
ggctctggtaagaccttgattgcggtgatgattatgaaagaggttggtcaaaccatcaag
tctttgggaatgaagaagctgattgttttcttggctcccacagttcatctagttaatcag
caattcaataatataagatatctgacagattttcaagttgaggaatactatggggctaaa
ggagttgatacatggactttgaagacatgggagcaggagattagtaccaatgatgtattg
gttatgacacctcagattcttttggatgccttaagaaaagcattcatgcgtatggaaatg
atatgcttgattgttattgatgaatgtcatagagcaactggcaatcatccctatacaaaa
ataatgaaggaattttatcaccaagcaaaggaaaagccaaagatttttgggatgacagca
tcaccggttggtaaaagaggtgtttcctccactacggattgcgaggttcaaatatcagaa
cttgaaagcatcttggattctcagaggtatactgttgaagatcgggcagagatgagtaga
tatatattgtctgctaaagagagttgtagatttcatgaccaagcacgattttctgccttg
agtttgaaaccaaagattgaagccttgtggtcaaagtttgatgcattgttatcagaaaat
aaaagcaactatatggatgtggagaataaatttaagacactgtctcagcgaatgtccaat
gaacttggaaaaattttacattgccttgaagatcttggaatcctatgtgcttatgaggca
gttaaaatctgtcacgagaatttctccaaaactgaaggaacgtgtgaaacttacagaaca
ggttatcttcagtgtataacttttgttgaagaagtaataaaattaattgaagaatccctc
cattgtgatgataaaaacattttgggggttgattttgattattcaaaggcagaagatatg
ggacacatatctcccaagttacttgaacttattaaaatcttccaatcacttggagaatct
agtcaggtgtcgtgccttatttttgttgatagaatcattacagctaaggtgattgaaaga
tttgcaaagaaagttccccaaatttctcatttctcagtttcctatttaactggaaacagt
acatcggttgatgctgtggctcctaaaaggcagaaggaaatattggaatcttttcgctct
ggaaaggtcaatctattatttactactgatgtacttgaggaaggaattcatgtgccaaac
tgctcatgtgtgataagatttgacctcccaaagacagttcgtagttatgtccaatctcgc
ggaagatctaggcaggctaactcccaatttgttgtgatgttggagaggggaaacctgaag
caaagaaatcaactctttgacatcattaggagtgagcgctccatgactgatgcatctata
cataaggaccgtgaatctaatttaagggtatttacagtggggaaaacagatacatactat
gtggattctactggagcttgtgtgactttagattctagtgtaaatcttatccaccgatac
tgtggaacacttccccaagatcagtactcctctgcaaagcccacttatgtgtctctgcca
gtggaagggggttaccaatgtaaattaacattgccatctaattcagtcctccagacaata
attggtccattaggaaaagatattcgtttggcaaggcatcttgcttgtttcgaagcttgt
aagaagttgcatcaaatgggtgctttaaatgaacatttggttccattcatcgaagatgtt
tcagaagatgaccatatcgtgaaaaataaagaatctagttcgggggcaggaaccacaaag
agaaaggagttacatggaacagccaacatttgtgcactaagtggtgcatggggagacaaa
cttgatgttgaagccagattttttgcctacaaactagaattcacatgtagtattgttagc
gaaatatactctgggtttgttcttttggttgagtcaaagcttgatgatgatgtgggaaat
attgaatcagatctttatttagtctcaaaggtcgtgaaagcttctgtctcttcatgtggg
caagttgatttggatgctaaacagatgatgaaagcaaaatgcttccatgagctttttttc
aatggtttgtttggtagattggtgtttaggtcaaaatcggcaggaggagaaacagaattt
ttactacaaaaagacacaaaatcattatggagagcaaaacacttatatttgcttctacca
cttgagaaattgaatggtatttgtgagggagccttgcaaattaattggcatggaattgat
tcttgtgcatctgctatcgaattcttaaggagaagatattctttggtcactggagattgt
gatgataacggaatagtcaaatcacctcaggataccagttcagtggagatggaatatgtt
ggaacaaacaagattcactttgctaattgtgtgcttgatgctgacaatataaaaaacacg
ttggttttggcgattcatactggaaaaatatattgtatcattgacattgacagtaacctg
tttcctgaaagttctttctgtggaaataatgaaaaatccaaggaacacgttacctactca
gattatttcagtaaaaggtatgggattaccctgagacatccgagacaggctcttttatta
ttaaagcaaagtcataatccacacaatcttctttttaactttcatgaggaagatgcacga
gacaaatcatcacaaattggctctacaacctccaaagtgcctgcacatgttcacctccca
cccgagcttttatatgttcttgaatttaaaagaaacgtgttgaggtcattttacttgttg
ccatctctaatgtaccgcattgagtcattaatgttatctagtcagcttagagaagagata
gatggtcaaactagcaagtccaacataaatagctcactgattctagaggcacttacaact
ttgagatgcagtgaaagtttttcaatggaacgtcttgagttgctaggagattctgtttta
aagtatgtggtgagctgtcacctctttcttaaatatcccaagaagcatgaaggacaatta
tctgccaaacgatctctagcagtttgtaattcaacccttcataaattggcaatagaacgt
aaattacagggttatattcgagactctgcatttgaaccacaacgttgggttgctccggga
cagcgttctatacaccctgtttgttgtgattgtggattggaaacccttgaagtgccttta
gatgttaaattccacaccgaggatcccaaagttgtggttgggaagttttgtgacaggggt
caccgctggatgtgttctaagactatttctgactgtgttgaagctctaataggagcatac
tatgtggggggtggactatttgcatcacttaatgtgatgaaatggcttggaattgaagca
gaacttgaactatccttggttgacgaagcaatcactgctgcctctctgcatacttgcatg
ccaaaagaaagtgagattgcaatccttgaaaagaaaattgggtatgaattttctgtcaag
ggactcttactggaggctatcacacatttgtctgagaaggaacttgggattggctgttgt
tacgagaggcttgaatttcttggtgactcagtgttggacctgcttatcacatggcattta
tataagagtcacacagatattgatccaggggtgttgactgacttgcgatctgcctctgtc
aataatgacaactttgctcaagttgctgttagacataaccttcaccagcatctcctacat
ggctcaggattattactgagccagatatcagaatatgttaaggccatttctgaatcggat
cctagatcacttccaagcattagagctccgaaggcacttggagatctagtggaaagtatt
gttggcgcaatgctaattgattccaagctcggtctagaccgagtgtgggaggttttctgt
cctctcttatcccccatagttacacctgaaaaacttgaattgcccccgtttcgtgaatta
aatgaattgtgtgattctcttgggtactgtataaaagtaaatgaaaactgtgaaaaaaag
ggatccatgatgcaagttgaggttagtgtacagttgccaaatgatttgttggttcgtgaa
ggaaaggggccaaataagaaaactgcaaaaggagaagcttcttttcatttgttgaaggac
cttgagaagcggggaatttcatattgtaatttcatgtccaagggaaaaagggataattct
gtccatatcaatgattcacctcatctcaaaatggattctagtgcttgttttactcttaac
gaagaacattcctcagagttacataaaaggaacagatttgataaaacaaacccaactgaa
agtattttgcctctcaaatactcttctggtgacgactttggttttagtgctccaattcca
gttaagttatcaattaaaacgaaaaagggaggaccacggaccacactatttgaggtgtgt
aagaaacttcagtggccagtgcctgcatttgattcaacagaatataaagatagatctcta
tttgaatcctgtgaagctctgcaaggaagcaagggactgaactgttttgtgtcgaaagtt
accttgtgcatacccaagtatggaaatatagagtgccaaggagaagctagaagtgataag
aaaagctcctttgactctgctgcagttaaaatgcttcttgagctgcaaaaattgggaaaa
gttgaaattgatcctcccctttctagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (12)   
   Pfam (12)   
All databases (36)   

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