KEGG   Vibrio rotiferianus: BSZ04_07840
Entry
BSZ04_07840       CDS       T05115                                 
Name
(GenBank) ClpV1 family T6SS ATPase
  KO
K11907  type VI secretion system protein VasG
Organism
vro  Vibrio rotiferianus
Pathway
vro03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vro00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BSZ04_07840
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vro02044]
    BSZ04_07840
Secretion system [BR:vro02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BSZ04_07840
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_22 Sigma54_activat nSTAND3 AAA_7 AAA_30 IstB_IS21 AAA_14 AAA_25 RuvB_N NTPase_1 DUF815 NACHT TIP49 Clp_N AAA_24 Zeta_toxin Rad17 SLFN-g3_helicase NB-ARC
Other DBs
NCBI-ProteinID: ASI94914
Position
1:1708157..1710712
AA seq 851 aa
MASLSLSALVERLSPHAKETLEQAAALASSRTHHSIELSHWLTAIIQHPEDLYLDVFDKL
DIDKQTVLNELLTQLEKYKTGCETVPGLSAHTVTVMQNAFMAATIEFKQDKLTCIHVLYA
YLSDDTLINMLSAVSPELSQIDPNKLLNLGEHTESKTHVSQTAGGALEQFTIDLTEQARL
GLIDPVIGRDDEIRLMIDILLRRRQNNPILTGEAGVGKTAVVEGLAQRIVDKDVPPALQN
VSVKSLDLALLQAGAGMKGEFENRLKNLIKEVNQSVDPVILFIDEAHGLIGSGGQAGQGD
AANILKPALARGELRTIAATTWAEYKKYFEKDAALTRRFQVVKVDEPSTELAIDMLRGLL
TVMADHHDVYITSQALASAVQLSARYINGRQLPDKAVSVLDTACSRVALSQSSTPGLLDS
KRKKLTLKEEELTQLSKEALFGSDLGHNVGQVGHEIEVLKGEIIALEERWREEVEWVSQA
KALRLKITEDGLDEDRRELVEIEEKLSLSADPLVFSHVNETLVAEVISDWTGIPLGKLQN
DEIEAVLNLKDSLCERVVGQDHALEVMAEVIKTARAQLMDETKPNGVFLLVGPSGVGKTE
SALAIAEKVYGSEDSVTTINMSEFKEEHKVSLLLGAPPGYVGYGEGGVLTEAVRRKPYSV
ILLDEMEKAHPGVQDIFYQIFDKGIIKDGEGRDIDFKNTIIIMTANTGSDTTTTLFSDPE
LAPDPQSLKEALREDLLKDFKPAFLGRVNILPYVPLSKSVLINISQLKINKIKARVFDHY
GATLTVTDDYILHLVESSNESESGARAIQTMMENLLLPRISNEILSSVLSNKKIKDIFVD
YTNDELIVSVS
NT seq 2556 nt   +upstreamnt  +downstreamnt
atggcttcgttatcattatcagcgttggttgagcggttgtcacctcatgctaaagaaaca
ttggaacaagcagcggcattggcaagctcgcggactcaccatagtattgaattatcccat
tggcttacagcaataattcagcacccagaagatctgtatttagatgtgttcgacaagtta
gatatagataagcaaacggtactgaatgaattactcactcagttggaaaaatataagaca
ggatgtgaaacagtccctggtttatctgcacatacagtgaccgttatgcaaaatgcattt
atggctgcaactattgagttcaagcaagataagttgacttgtattcatgtgctatacgct
tatttgtctgatgatacgctgattaatatgttgagtgcggtgagccctgaattaagtcaa
atcgatccaaataagttgttaaatcttggagagcataccgaaagcaaaacacatgtgagc
cagaccgctggtggagctttagagcagtttaccattgacctgactgagcaagcacgactg
ggacttattgatcctgtgataggtcgagatgatgaaatcaggttaatgatagatattctt
ctaaggcgtaggcagaacaatcccattttaactggggaggctggtgtaggtaaaactgca
gtggtcgaaggtttagcgcagagaatagtggataaagatgttccccctgctttgcaaaat
gtatcggtcaagtctcttgacctagcccttttgcaagctggtgcgggaatgaaaggggag
tttgaaaatcgtttaaaaaatctaattaaggaagttaatcaatcagttgatcctgtcatt
ctgtttattgatgaggctcatggacttattggtagcggcggacaagctggtcaaggtgat
gcagccaatatactcaaaccagctttagctcgaggggaactccgaacgattgctgcaaca
acttgggcagaatacaagaaatactttgaaaaagatgcagccttaactcggagatttcaa
gttgttaaagttgacgagccatccactgagttagcgattgatatgttacgaggtttgctg
acggttatggcagaccatcatgatgtatatattactagccaggctttggcctctgctgtt
caactttctgctaggtatatcaatggtcgtcaactcccggataaggcagtctcagttctt
gatacggcttgttctagggttgcgttgagtcagtcatcaacgccaggattgctagattct
aaacgcaagaaattaaccttgaaagaagaagaactcacccagttatctaaggaagcttta
tttggttcagatctcggacataacgttggccaagttggtcacgaaattgaggtgttaaag
ggagaaataatagcgctagaagaacgttggcgtgaagaagttgagtgggtctctcaagca
aaagcattacgtctaaagataaccgaagatggtttagatgaagatagacgagagctagtg
gaaatagaagaaaaactgtctcttagcgcagatccgcttgtattctcgcatgtgaatgaa
accttagttgcggaagttatatcagactggactggtattccacttggtaaacttcaaaat
gatgaaattgaagcggtactgaacctgaaagacagtttgtgtgaaagagtcgttgggcaa
gatcatgctttagaggttatggcagaagtaataaagactgcccgagctcaacttatggat
gagactaaacctaatggtgtcttcttactagtcgggccaagtggtgtaggcaaaacagag
tctgcactagctatcgcggagaaggtctatgggagtgaagatagtgtcacgacaatcaac
atgtctgaatttaaagaagagcacaaagtttccttactattgggtgctccacctgggtat
gtcggctatggtgagggaggagttcttactgaagccgtaaggagaaaaccatatagtgta
attttgcttgatgagatggaaaaagctcatcctggagtacaagatattttttatcaaatc
tttgataagggaatcattaaagatggcgaaggacgtgatattgattttaagaacacgatt
ataatcatgactgctaatacaggttctgatacgactaccactttgtttagtgacccagaa
cttgcgccagatcctcaatcactaaaagaagcgctacgtgaagacttacttaaggatttc
aaaccagcgtttttagggcgagtcaatattttaccatacgtaccacttagcaaatcagta
ttgattaatattagtcagctaaagattaataagataaaagcgcgagtttttgaccattat
ggtgcaactcttacagttacagatgattacatcttacatctagtagaaagtagcaatgaa
tctgaaagtggtgcgagggccattcaaaccatgatggaaaaccttcttcttcctcgaatt
tctaatgaaatattgtcgtcagttctcagtaataagaaaattaaagatatttttgtggat
tataccaatgatgaattaattgtctcagtttcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (25)   
   Pfam (25)   
All databases (32)   

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