KEGG T01084: 100246875

Vitis vinifera (wine grape): 100246875

Entry

100246875         CDS       T01084

Name

(RefSeq) pentatricopeptide repeat-containing protein At4g13650 isoform X1

Organism

vvi Vitis vinifera (wine grape)

SSDB

Motif

Pfam:

PPR_2 PPR PPR_3 PPR_1 DYW_deaminase E_motif PPR_long Eplus_motif Rib_mS39_PPR Plant_NMP1

Other DBs

NCBI-GeneID:

100246875

NCBI-ProteinID:

XP_059595279

Position

8:join(22222224..22222346,22222429..22225527)

AA seq 1073 aa
MLMVGDIQVFMVASSISLRGSLSNSLFHHFPRNITHRSSCKYFNGNVGRFKSARFCSTAI
WDALDESPVVENEGNGKGIDFLHLMEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARI
FKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVL
GLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDL
YSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVF
SSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHR
RDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQL
HSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNL
SESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVL
IDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDN
IGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEK
IDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQG
KQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQH
GYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEH
YVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELE
PEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLH
PLAEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTN
TMPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW

NT seq 3222 nt +upstreamnt +downstreamnt
atgttgatggtaggcgatattcaagtattcatggtcgctagctccatttctcttcgtggg
tccttgtcaaattccttgtttcatcatttcccgcgtaacatcacacaccggtcttcttgt
aagtactttaatgggaatgtgggtaggttcaagtcggctcgtttttgcagtaccgcgatt
tgggatgctttggatgaatctcctgtggtagaaaatgagggaaatggaaaggggattgat
tttcttcatctgatggaagagcgtggaattcgtgcgaatgttcagacttacctttggctc
tttgaaggatgtttcaattctgggtctctgttagatgctaagaagcttcacgctaggatc
ttcaagtccgggtttgatggagaagacgttttggggagccgactgattgatatttacctg
gcgcatggggaagtggataatgcaatcaagcttttcgatgatatacccagctcaaatgtt
tctttctggaataaagtcatttctgggcttttggccaagaagttggctagtcaagtactg
ggtctcttttcgctaatgataactgaaaatgtgactcctgatgaatccacatttgccagt
gtcttgagggcttgcagtggtggtaaagctcctttccaagtcactgaacagattcatgct
aagattattcatcatggttttggtagtagccctcttgtatgtaatcccttgattgatttg
tattcaaagaatgggcatgtagatttggctaaattggtctttgaaagattgtttttgaag
gatagcgtttcttgggtggctatgatctctggtttatctcaaaatgggcgagaagacgaa
gccattctcctattctgtcagatgcataaatccgccgttattcctactccttatgtcttc
tctagtgttttaagtgcctgcaccaaaatagagttgttcaagctgggagagcagcttcat
ggcttcattgttaagtgggggttatcttctgagacttttgtgtgcaatgcccttgtgaca
ttgtactcccgttggggcaacttgatagctgctgaacaaattttcagcaagatgcaccgc
agggatagaatttcgtataactcacttatatcagggctagcacaacgtggattcagtgat
agagctcttcagttgtttgagaagatgcagcttgattgcatgaaaccggattgtgttaca
gttgctagtctgttgagtgcttgcgcctcggttggtgctggttataagggaaaacaactt
cattcttatgtgataaagatgggaatgtcttcagatctcattattgaaggttctctactt
gacctttatgtaaaatgcttcgacatagaaactgcccatgaatacttcctaacaacagag
actgaaaatgtggttctatggaatgtgatgctagtggcttatgggcagttgggtaatcta
agtgagtcgtattggatatttttgcagatgcagatcgaaggactgatgcctaaccaatac
acctacccaagtatattgagaacttgtacttctttgggtgctctggatttaggagagcag
atccatacacaagtcataaaaagtggctttcagtttaatgtgtatgtttgtagcgtgctt
atagatatgtatgctaagcatggagaactagatactgcccggggaattctccaaagactg
agggaagaagatgttgtttcttggacagctatgattgcagggtacacacagcatgatttg
ttcgccgaagctctgaaactttttcaagaaatggaaaaccaggggatccgatctgataac
atagggttttctagtgcaatcagtgcttgtgctggtattcaagcattaaatcaaggacag
caaattcacgctcaatcatatatttctggttactcagaagatctttcaattggaaatgca
ctagttagtctttatgctagatgcggtagagcacaggatgcatacttagcatttgagaaa
attgatgctaaagataatatatcatggaatgctcttatatcaggatttgcacagagtggg
cactgtgaggaagcactgcaggtcttctctcaaatgaatcaagctggagtagaagctaat
ttgttcacatttggctctgcagttagcgccactgccaatacagcgaatataaagcaaggg
aagcagattcatgctatgatgataaaaacagggtatgactcagaaacagaggcttccaat
gttttaatcacattatattccaagtgtgggagcattgaggatgcgaagagagagttcttt
gaaatgcctgagaaaaatgtggtttcatggaatgcgatgatcacaggctattctcaacat
ggatatggtagtgaagctgtaagtctttttgaggagatgaaacagcttggtttgatgcca
aaccatgtcacctttgtgggggttttatcagcctgtagccatgtgggtttggtcaatgag
gggctcagctacttcaggtccatgagcaaagagcatggcctagtcccaaaaccagaacat
tatgtttgtgttgtggatcttcttggacgggctgctcttttgtgctgtgcaagagaattc
atagaggagatgccaattgaaccagatgctatgatttggagaacacttttaagtgcttgt
acggttcataagaacattgagattggagagtttgctgcacgtcatcttctagaattggag
cctgaagattcagcaacttacgtgttgctgtcaaatatgtatgcagtgtctggtaaatgg
gattatagggatcgaacaaggcaaatgatgaaagacagaggtgtaaaaaaagagcctggt
cgcagctggatcgaggttaaaaactcaattcatgccttctttgtgggtgatagactccac
cctctagcagaacagatatacgagtatatagatgacctgaatgaacgggcaggtgaaatt
ggttatgtgcaagaccggtacaaccttttgaatgatgtggagcaggagcagaaggaccca
accgcatatattcacagcgaaaaactagctgttgcttttggactcctcagcttgactaat
acaatgccaatacgtgtgattaagaatcttcgggtctgtaatgattgtcataactggatt
aagtttgtatcaaagatttcaaatcgagctattgtagtacgagatgcataccggtttcat
cattttgaagggggtgtttgttcctgtaaagattactggtaa

All links

Gene (30)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (29)   
   RefSeq(nuc) (3)   
   GenBank (13)   
   EMBL (13)   
Protein domain (10)   
   Pfam (10)   
All databases (72)   

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