KEGG   Vitis vinifera (wine grape): 100250407
Entry
100250407         CDS       T01084                                 
Name
(RefSeq) uncharacterized protein LOC100250407 isoform X1
  KO
K24742  WD repeat-containing protein 25
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:vvi04990]
    100250407
Domain-containing proteins not elsewhere classified [BR:vvi04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   100250407
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40 WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th PAN2_N WD_LRWD1 Beta-prop_IFT140_1st Beta-prop_VPS8
Other DBs
NCBI-GeneID: 100250407
NCBI-ProteinID: XP_002280346
UniProt: F6H2H0
Position
19:join(4985367..4985601,4988608..4988772,4997032..4997516,4998500..4998871)
AA seq 418 aa
MDLLCNAYSTPSDDDDDEPRPVAEPTPPPLKRFKPQNPPLLPKPYPLIAGRYISKRERSL
LSPALSPPLPNPAASASPVMGSISDSDLPRDILSSLRHQAKGRSQLGRISERLSVDLKSH
KKSVNTIQWSPTHAHLLASAGMDHAICIWNAWSRDQKKAREFSYHNAAVKDVKWLQQGLS
VLSCGYDCSSRLIDVEKGLQTQIFTEDQVVGVIKLHPDNSNLFLSGGSKGRLRLWDIRTG
KVVHEYIRGLGPILDIEFTVNAKQFISSSDVSGSNMSENSIVVWDVSRQVPLSNQVYVEA
YTCPCIRCHPSDPFFIAQSNGNYIAIFSSCPPFKLDKYKRYENHGVSGFPIKCNFSLDGE
KLASGSSDGCIYLYDYRSSELVQKIKAYEQACIDVAFHPLLPNVIAACGWDGAVSVFE
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggatcttctgtgcaatgcgtactctactccttcagacgacgacgatgacgaaccacga
ccagtagcagaaccaacaccccctccattgaagcgatttaaaccccaaaaccctcctctc
ctccccaaaccctaccctctcattgctggcagatacatatccaagagagagcgatctctc
ctcagcccggccctttctcctccccttccgaatccggctgcctctgcatctcctgttatg
ggtagtatttcagattcagatctaccacgtgatatcttgtcatcattgaggcatcaagca
aagggccgttcacagctaggtcgaatatctgaaaggctgtccgtagatttgaagagccac
aaaaagtctgtcaatactattcagtggtcaccgacccatgcccatcttcttgcttccgct
ggaatggatcatgccatctgcatatggaatgcatggagtagagatcagaagaaagcacgt
gaattcagctatcataatgcagcagtgaaagatgtcaagtggttgcagcaaggattatct
gtgctttcttgtggatatgactgctcgtcaagattaattgatgttgagaaggggttgcaa
actcagatttttacagaggatcaggtggttggtgtcataaagctccatccagacaactcc
aacctcttcctgtctgggggatcaaaaggacgcctcagattatgggatattagaactggc
aaggtagttcatgaatacattcgaggtcttggtccaatacttgacattgaattcactgtt
aatgccaaacaatttatctcttccagtgatgtgtctggaagtaacatgagtgagaactct
attgttgtttgggatgtctcacgacaggttccattgtctaatcaggtttatgtggaagcc
tatacctgtccctgcattagatgccatccatctgatccatttttcattgcgcaatcaaat
ggaaattatattgcaatcttctcgtcatgccctcctttcaaactagacaagtacaagagg
tatgagaaccatggggtttctgggttccccatcaagtgcaacttcagtttggatggtgag
aaactcgcctcaggctcctcggatggttgtatatacctttatgactacagatcatctgaa
cttgtccaaaaaatcaaggcatatgagcaagcatgcatagacgttgctttccatcccctc
ttacctaacgtgattgctgcatgcggttgggatggtgcggtttcagtgtttgagtga

  All links  
Gene (17)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (29)   
   Pfam (29)   
All databases (55)   

Download RDF
DBGET integrated database retrieval system