KEGG   Vitis vinifera (wine grape): 100252767
Entry
100252767         CDS       T01084                                 
Name
(RefSeq) protein TORMOZ EMBRYO DEFECTIVE
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100252767
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vvi03009]
    100252767
Ribosome biogenesis [BR:vvi03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    100252767
SSDB
Motif
Pfam: WD40 Utp13 NBCH_WD40 Ge1_WD40 Cytochrom_D1 SGL Nbas_N PROPPIN WD40_like Cdh1_DBD_1
Other DBs
NCBI-GeneID: 100252767
NCBI-ProteinID: XP_002272675
Position
16:complement(join(1293197..1293562,1294171..1294345,1294415..1294545,1296072..1296191,1297394..1297470,1297549..1297795,1297951..1298107,1298634..1298752,1299041..1299175,1300181..1300466,1300615..1300835,1302227..1302376,1303670..1303852,1304620..1304916))
AA seq 887 aa
MASPTLKKNYRSTPALQQFYTGGPFAVASDGSFIVCACDDAIKIVDSSNASIRSVVEGDS
QTVTALALSPDDRLLFSSSHSRQIRVWELSSLKCIRSWKGHEGPVMGMACDASGGVLATA
GADRKVLVWDVDGGYCTHYFKGHKGVVTSIIFHPDVNRLLLVSGSDDATVRVWDLMSKKC
VATLERHFSAVTSLAVSEDGWTLLSAGRDKVVNLWDLHDYSCKLTVPTYEVLEGVCVIHS
KSPFASSLDSYKRQKGRKKKSESPAIYFITVGERGTVRIWNSEGAVCLFEQQSSDVTVSS
DSDDSKRGFTAATILPLDQGLLCVTVDQQFLFYSTLTHSEEMLKLMLSKRLVGYNEEIVD
MKFLGEDEQFLAVATNLEQVQVYDLASMSCSYVLSGHTGIVLCLDTCVSSSGRTFVVTGS
KDNSVRLWESESRCCIGVGTGHTGAVGAVAFSKKLRNFFVSGSSDRTLKVWSLDGLSDDT
EQPISLKAKAVVAAHDKDINSLAVAPNDSLVCSGSQDRTACVWRLPDLVSVVVLKGHKRG
VWSVEFSPVDQCVMTASGDKTIKIWAISDGSCLKTFEGHTSSVLRASFLTRGTQVVSCGA
DGLVKLWTIKTNECIATYDQHEDKVWALAVGKKTEMLATGGSDAVVNLWHDSTASDKEEA
FRKEEEGVLKGQELENALSDTDYTKAIQIAFELRRPHKLFELFSELSRKREAAEQVEKAL
HALGKEEFRLLLEYVREWNTKPKLCHVAQFVLFRVFSMLPPTEITEMRGIGELLEGIIPY
SQRHFSRMDRLIRGTYLLDYTLTGMSVIEPETDAKEIKDEPETWPEVKDSGDWPSPENAD
EEQEQTLEGLKEKASSKKRKSRKSRDRAQKKVKETAYTKISAISLQA
NT seq 2664 nt   +upstreamnt  +downstreamnt
atggcgtctccgacgttgaagaagaactacaggtccacaccggcgctgcagcagttctac
acaggcggccccttcgccgtcgcttccgacggctccttcattgtctgcgcctgcgacgat
gccatcaaaatcgtggactcctccaatgcttcaatcaggtctgtcgtcgaaggtgactca
cagaccgtcactgctctcgctctcagtcccgatgacagactgcttttctcctcgagccat
agcaggcagattagggtttgggagctttcatcgctcaagtgtattcgctcttggaagggg
catgagggtcctgtgatgggcatggcttgtgatgcctctggtggagtgcttgcaacagca
ggagctgataggaaagtccttgtatgggatgttgatgggggttactgcactcattatttc
aaaggccacaaaggggttgttactagtatcattttccatcccgatgtgaatcgccttctt
cttgtgtctggaagtgatgatgcgactgtaagagtgtgggatctcatgagcaagaagtgt
gttgcaaccctggaaaggcacttttcagcagtgacttctttggcagtgtctgaagatgga
tggaccttgctcagtgctggaagagacaaggttgtaaacttgtgggaccttcatgactat
agctgcaaattgactgtcccaacatatgaggtgcttgaaggcgtatgtgtgattcattcc
aagtctccctttgcttcatctctagattcatacaaacggcagaagggtaggaagaagaaa
agtgagtcaccagcaatttattttatcacagttggagaacgtgggactgttcgaatatgg
aactctgaaggtgcagtttgcctatttgagcagcaatcctcggatgtcaccgtcagctca
gacagtgatgactctaaaaggggtttcactgctgccactatcctgcccttagatcaagga
ttgctttgtgtgactgttgatcaacagtttcttttctattctacactgacacattctgaa
gagatgttgaagttaatgctgagtaaaaggcttgtaggatataatgaagagattgtggat
atgaagtttcttggtgaggatgaacaatttcttgctgttgctacaaatcttgaacaggta
caagtgtacgaccttgcctccatgtcatgttcctatgtactgtcaggtcatactggcatt
gttctctgccttgacacctgtgtatcgagttctggaagaacatttgtcgtaacaggaagc
aaggacaacagtgttaggttatgggaatcagaaagcagatgttgcattggtgttggtaca
ggtcatactggagctgttggagctgttgctttttcaaagaagttgcggaacttctttgtt
agcggtagtagtgaccgcaccctcaaggtttggagtttggatggtctgtctgatgacaca
gaacagcctatcagtttgaaggcaaaagcagttgtagctgcccacgataaagatataaat
tcattggctgttgcaccaaatgatagtcttgtttgtagtggttctcaggaccgcactgct
tgtgtatggaggcttcctgatctagtgtctgtggttgtacttaaagggcataagaggggt
gtttggtctgtagagttttcaccagttgatcaatgtgttatgacagcatctggtgataaa
acaataaagatatgggccatatctgatggttcatgcctgaaaacatttgaagggcataca
tcaagtgtgttaagagcatcattccttactcgtggaactcaagttgtttcttgtggtgct
gatggtttggtaaagttatggaccattaaaactaatgaatgcattgccacttatgatcaa
catgaggacaaggtttgggccctggctgttgggaagaagacagaaatgcttgcaactggt
ggcagtgatgctgttgtcaatctgtggcatgactctactgcttctgataaagaggaagct
ttccgtaaggaagaggaaggggttctaaaaggccaagaactggaaaatgctttatcggat
actgactacactaaagcaatccaaattgcattcgaacttcgcagacctcacaaacttttt
gagttgttttccgagcttagcaggaagagggaggctgcagaacaagtagaaaaagccctt
catgcccttggcaaggaagaattccgtctactgctcgagtatgttcgagaatggaataca
aagcccaagctctgtcatgttgcacaatttgtgcttttccgggttttcagcatgcttcct
ccaacagagattactgagatgagaggcattggagaactccttgaaggtatcatcccatat
tcccagaggcatttcagcaggatggacagactcataaggggcacatatttgttggactac
accctaacaggaatgtcagtcattgaaccagaaactgatgccaaagagatcaaagacgag
ccggagacatggccagaagtgaaggattcaggcgactggccatcaccagaaaatgcagat
gaagagcaagaacaaaccctagaagggctgaaagagaaggcatcttcaaagaaacggaaa
tcgcgtaaatccagagaccgtgcacagaagaaagtcaaggagacagcttacacgaagatc
tcagccatctcattacaggcgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (10)   
   Pfam (10)   
All databases (46)   

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