KEGG   Vitis vinifera (wine grape): 100253286
Entry
100253286         CDS       T01084                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03020  RNA polymerase
vvi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100253286
  09124 Replication and repair
   03420 Nucleotide excision repair
    100253286
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vvi03021]
    100253286
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100253286
Transcription machinery [BR:vvi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100253286
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100253286
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C
Other DBs
NCBI-GeneID: 100253286
NCBI-ProteinID: XP_002276956
UniProt: A5AGZ7
Position
5:join(991598..991626,991788..991863,994906..995064,995643..995723)
AA seq 114 aa
MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEIHHSVGERTQVLQ
DVAADPTLPRTKSVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtactatgaagttttgccgagaatgcaacaacattctctacccaaaggaagatcgg
gagcagaagatccttctctatgcctgccgaaactgcgatcaccaggaggttgctgagaac
aactgtgtctatagaaatgagatacatcactctgttggggagcgcactcaggtcttgcag
gatgttgctgccgatccaacacttcctcgtactaaatccgttcgttgcgcacaatgcaat
catggagaagctgtcttcttccaggcaactgctagaggggaggaaggtatgacactgttt
tttgtttgctgcaatccaaactgtggctatcgctggagagattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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