KEGG   Vitis vinifera (wine grape): 100253902
Entry
100253902         CDS       T01084                                 
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
  KO
K08739  DNA mismatch repair protein MLH3
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    100253902
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100253902
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     100253902
SSDB
Motif
Pfam: MutL_C HATPase_c_3 DNA_mis_repair HATPase_c MPLKIP
Other DBs
NCBI-GeneID: 100253902
NCBI-ProteinID: XP_010649435
Position
4:complement(join(22951205..22951378,22951854..22951939,22952099..22952171,22952339..22952398,22952724..22952772,22953072..22953178,22953296..22953349,22953436..22953480,22954063..22954260,22954383..22954456,22954839..22954954,22955049..22955142,22955227..22956702,22956780..22956860,22956943..22957012,22957962..22958182,22958301..22958316,22958393..22958558,22958650..22958742,22958868..22958925,22958999..22959056,22959170..22959324,22959874..22959921,22960012..22960063,22961689..22961814))
AA seq 1249 aa
MRSIKPLPEAVHSSVRSGIILFDLTRVVEELIYNSLDAGATKVSVSVSVGTCYIKVVDDG
TGVTRDGLVLLGERYATSKLHHLTEMDAATGSFGFRGEALGSISDVSLLEIVTKTQGRPN
GYRKVMKGCKCLYLGIDDDRQDVGTTVVVRDLFYNQPVRRKYLQSSPKKVLHSVKKCVFR
IALVHSNVSFKVVDIESDDELLCTKSSSSPLSLLISGLGIEDSSSLHELNITDGILKLSG
YVSGPCNTFSIKAFQYVYINSRFICKGPIHKLLNQLATGFKSFDPWKASSGSQDKKRSRC
QGYPTYILNLRCPQSHYDLTFEPSRTAVEFKDWVPILAFLEKAVTRFWSEHIAHGESSVH
ANKTSGQELWKEHGNVVSAEEDLSEVAKRQCRIQNCLLGCLSSPMELLTEENDHFSCRKE
NKIPFQKLRNDTSEFEGQRNKIGFVHQIDSSFQSLDDSPSKCISGVHPHTEHLELPDDNF
FITKNNFLENKFTVLESSFDHVEDKILGSTWGNESLNVDHDMGNGFSALSYNSYEFRNGV
EEASKDFKKPILQSCSLGRSLLSDWESDKFEFQIDGLRTRQRQIDHNKSFDFFPGTAWQE
EASSDWPSSRLKTKPEMCTGLDFMSRDSLKSLSTYRERFAVENNLPPDSVEQSGKFGSGH
LSLNSECCSMVSQSLFQTTPWDVEHFTHENTPQGGLGSDRNVSYEHFIDSESGGWIFSHD
IMPSSSSQENCSSSSCINTGLGLKDYTVPSRDIYRLLKENNLDNIFTPRHSDILSIETDW
LYSKSCGKDNNNNRAVPSCSIPLSTNIHKDENKKERLRYQNCGQIHASKERSRSHSAPPI
YRGKRKFLALNDHWTMESKKVDVIDSHDAPTFPETDELKHPLQSSGACNQYFKPSFLEDP
LFYGRSDMKKMLENEPDMDKIQNIDIFRKSQCLPIDDDSYSFKDFTTKEATDLMNSESKW
RNNCPKIASGDKSQKFNDQYNVLDISSGILHLAGDSLIPQSITKNCLQDAKVLQQVDKKF
IPVVADGTLAIIDQHAADERIRLEELRQKVLSGEVKTITYLDAEQELVLPEIGYQLLHTY
AEQIQNWGWICNIHAQNSRSFTKNLDLLHKKPTVITLLAVPCILGVNLSDVDLLEFLQQL
ADTDGSSTMPPSVLRVLNLKACRGAIMFGDALLPSECSLIVEELKRTSLCFQCAHGRPTT
VPLVNLEALHKQIAKLGSGGGGSIELWHGLRRHELSLERAAHRLNSSMG
NT seq 3750 nt   +upstreamnt  +downstreamnt
atgaggagcatcaaacccttgcctgaggctgttcacagctcagttcggtctggaataatc
ttgtttgacttgactagggttgtggaagagctgatatataacagtcttgatgctggtgca
acaaaggtgtctgtttctgtaagcgttgggacctgttatattaaagtagtcgatgatggc
actggtgttactcgggatggattggtattgttgggagaaagatatgcaacatcaaagctt
catcatttgactgaaatggatgctgctactggtagctttggttttcggggtgaagcattg
ggctccatttctgatgtttcattgttagaaatagtgacaaaaactcaaggaagaccaaat
ggatatcgcaaagtcatgaagggctgcaaatgtttgtatcttggaattgatgatgatagg
caagatgtaggcacaacagttgttgtccgtgatttattttacaaccaaccagttcggagg
aagtatttgcaatctagccccaagaaggtcttgcactcggtcaagaaatgcgtatttcga
attgccctagttcactcaaatgtttctttcaaagttgttgatattgaaagcgatgatgag
cttctctgcacaaaatcgtcctcttctcctttgtcactgctaattagtggtttggggatt
gaggattctagctcccttcatgaattgaacataactgatggtatattaaagctttctgga
tatgtttctggtccttgcaatactttctccattaaggcctttcaatatgtctatatcaac
tcacggttcatttgcaaaggcccaattcataaactgctgaatcagttggctactgggttc
aagtcttttgatccatggaaggctagcagtggctctcaagacaagaaaagaagtaggtgt
caaggatatccaacatatattttgaacttaaggtgccctcaatctcactatgatttaact
tttgaaccatcgaggactgctgttgagttcaaggactgggttcccatacttgcctttctt
gaaaaagctgttacacgcttttggagtgaacatattgcacatggagaatcctctgtgcat
gcaaataaaacatcaggacaagaactgtggaaggaacatggcaatgttgtatcagctgaa
gaagatttgtcagaagttgcaaaaaggcagtgcaggattcaaaattgtcttctgggctgc
ctctcttcccctatggagttgctaactgaagagaatgaccatttctcttgtagaaaagaa
aataaaattccatttcagaagttacgcaatgatacctcagaatttgaagggcaacggaat
aagattggatttgttcatcaaattgactcttcattccaatcactggatgattctccttcc
aaatgcatatctggtgtgcatccacatactgagcacctagagttgcctgatgacaacttt
ttcattacaaaaaacaacttcctggagaataaattcacagttctagaaagttcttttgat
catgtagaggacaagattttgggttcaacatgggggaatgagtcccttaatgttgatcat
gatatgggcaatggatttagtgcactatcttataacagttatgaattcaggaatggtgtt
gaggaggccagcaaggatttcaagaaacctattctgcagagttgctccttggggagaagc
ttgctatctgattgggagagtgataaatttgaatttcaaattgatggcttgaggactagg
caaaggcagattgaccataataagagctttgatttttttccaggtactgcatggcaggaa
gaggcatcaagtgattggccctcttccagactcaaaacaaaacctgaaatgtgtacaggt
ttagattttatgtccagagattctttaaagtcactctcaacttatagagaacgttttgca
gtggagaacaacttgccacctgattcagttgaacaaagtggaaaatttggctcaggccat
ctgtctttgaactctgaatgctgttctatggtatcacaaagcttatttcagaccacacct
tgggatgttgaacatttcacccatgaaaatactcctcaagggggccttggatctgatagg
aatgttagttatgaacattttatagatagtgaaagtgggggatggattttcagtcatgat
attatgccaagtagctccagccaagaaaactgctcatcctcaagttgtataaacactgga
ttaggtcttaaggactacactgttccaagtagagatatctacagacttcttaaagagaac
aatctggataatatctttactccaagacattctgatatactaagtattgaaacagattgg
ttatactcaaaatcatgtggtaaagataacaacaataatcgtgcagtgccatcatgcagc
attcctttatctaccaatattcacaaggacgaaaacaaaaaagagaggctcagataccaa
aattgtggacaaattcatgcttcaaaagaaagatcaagaagtcattcagctccaccaatt
tacagaggcaagagaaagttcttggccttaaatgatcattggacaatggaatcaaaaaaa
gtagatgtcattgatagccatgatgcccccacttttccagaaactgatgaattgaagcat
cctctacaatcttctggtgcatgtaatcagtattttaagccaagctttttggaagaccca
ttgttctatggcagatctgatatgaagaaaatgctggaaaatgaaccagatatggataag
attcaaaatattgacatttttaggaagtctcaatgtctccctattgatgatgattcttat
tctttcaaagactttaccacaaaggaagctacagatttgatgaactctgagagcaagtgg
aggaataactgtccaaaaattgcaagtggagataaatcgcagaagtttaatgatcaatac
aatgtacttgacatctcttcggggatcttgcaccttgctggcgattcattaattccacaa
tccataactaagaattgccttcaggatgccaaagttctccaacaggtggacaagaaattt
atcccagttgtggctgatggaacgcttgctattattgaccagcatgctgcggatgaaaga
attcgactggaagaactccgccagaaagtgttatctggagaagtgaagacaattacatat
ctggatgctgagcaagagttggtactgccagagattggctatcagttactgcacacttat
gctgaacagatacagaattggggttggatctgcaacatacatgctcagaattcaaggtcc
ttcacaaagaatttggatcttcttcacaaaaagccaactgttatcacacttcttgcggta
ccctgtattttaggtgtcaacttatcagatgtagatcttttagaatttcttcagcagctt
gctgatacagatggatcatcaacaatgccgccatctgttctccgggtccttaatctcaaa
gcatgccgaggggctatcatgtttggggacgctttgctaccttcagaatgttcccttatt
gttgaagagctaaagcggacctccttgtgtttccagtgtgctcatggacgaccaacaact
gttccccttgtcaacttggaggccttgcataaacagatagcaaagcttgggtcggggggt
ggtggttcaattgagttgtggcatggattacgacgacatgaacttagtcttgaacgtgct
gcacatcgtttgaactcatctatgggttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (59)   

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