KEGG   Vitis vinifera (wine grape): 100257200
Entry
100257200         CDS       T01084                                 
Name
(RefSeq) uncharacterized protein LOC100257200 isoform X1
  KO
K14573  nucleolar protein 4
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100257200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vvi03009]
    100257200
Ribosome biogenesis [BR:vvi03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    100257200
SSDB
Motif
Pfam: RRM_1 RRM_7 Arc_PepC_II
Other DBs
NCBI-GeneID: 100257200
NCBI-ProteinID: XP_010647688
Position
3:join(86020..86121,86442..86502,87255..87291,89409..89539,89647..89742,89846..89924,90351..90484,91908..92047,94776..94826,94915..94997,95079..95133,95243..95357,97021..97537,97622..97835,97956..98026,100120..100288,100421..100550,100770..101458)
AA seq 957 aa
MGKKNKTEGGGARDQHCPSTVFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEHR
GFGFVQFAVKEDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKENQAVHSDDIIKT
RTEKDSSSEVVKQGHASDLQEIEKHVELRKALKPCTDQADKGSFSEKQRVARTVIFGGLL
NADMAEVVHLRAREVGTVCSVTYPLPKEELEHHGLSQDGCKIDASAVLYSSVKEAHASVA
MLHQKEIKGGIVWARQLGGEGSKTQKWKLIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQ
NSETGLSRGFAFVKFTSKQDAENAIQKFNGEKIGKRPIAVDWAVPKKIYITGANPVVASE
DGQLNGRDGEGDTDSDDLEDDTTDIDNKVPHPQGVGSAPDDSNTTEKEVMPTEFDFNEEA
DIARKVLKNLITSSAKGTLPSSSGGPTDLNFDETIDVLKKTSNESEKASDVTEPENSSKS
KLLNLRPIESEDDLQRTIFISNLPFDIDKEEVKQQFSKFGEVQSFVPVLHQVTKRPKGTG
FLKFNTVAAADAAVSAANPTSSLGIFLKGRQLTALKALDKKSAHDKELKKSKPEERDHRN
LYLAKEGLIVEGTPAAEGVSASDMSKRHMLARQKDTKLESPNFHVSRTRLIIYNLPKSMT
EKEVKKLCIDAVTSRATKQKPMIKQIKFLKDMKKGKVVTKNHSRGVAFIEFTEHQHALVA
LRVLNNNPETFGPEHRPIVEFALDNIQTLRQRRAKLEAYQQINHGYPEDLQPNDDPNTPE
ASPNKKMKSRKRKSRDNDGPLKTSEPNEGDEPEDKVIKGAVIDRHGAAKKHKINPAKEKQ
KDKRKKLNNSHGIGKPDDEKPLKAESTISKARNSKSSEESNMLPKKRKLQEHIAVQEGKS
PKQKTRTRRSKDPSGQVILDKLDMLVEQYRAKFSQQTDDKTDGQKQGSRQLKRWFQS
NT seq 2874 nt   +upstreamnt  +downstreamnt
atggggaagaagaacaaaacggagggtggcggagcaagagatcaacactgcccttcgact
gtgttcgtctccaactttccttactcattcaccaactctcagctcgaagaaacattcagt
gatgttggaccgattaggcgctgtttcatggtcacacagaaggggtcaaccgaacaccgg
ggatttggttttgttcaatttgctgttaaagaagatgctaaccgggctattgaactgaaa
aatggttcatctattggtggtcggaaaatcggagttaagcttgccatgcaccgtactccc
cttgaacagcgtcgatccaaggaaaatcaagcggttcattcagatgatatcattaagaca
agaacggaaaaggatagttcttctgaggtggtcaagcagggacatgcttcagacttacag
gaaatagagaaacatgtggaactcagaaaagcactgaaaccttgcactgatcaagctgat
aaagggagcttttcagaaaagcagagggttgctcggactgtcatatttggtggacttctt
aatgctgatatggcagaggttgttcacctccgagccagagaggttggcactgtctgttct
gtaacttatcctcttccaaaagaagagcttgaacaccatggtctctctcaagatggatgc
aaaatcgatgcctcagctgtgctttattcaagtgtcaaagaggcacatgcttctgttgcg
atgttacatcaaaaagagataaagggaggaattgtttgggcacgtcaactgggtggggag
ggctccaagactcaaaaatggaaactcatagttagaaatcttcctttcaaggctaaagtg
accgagataaaagatattttttcatctgctgggtttgtatgggatgcatttattccacag
aattctgagacagggttatctagaggttttgcatttgttaagttcacaagcaagcaagat
gcagaaaatgcaatccagaagttcaatggggaaaaaattggtaaaagacccatagctgtt
gactgggctgttccaaagaaaatttatatcactggtgctaatcctgttgttgcatcagaa
gatggacaactgaatgggagagatggggaaggtgatactgatagtgatgatttggaggat
gacactacagatattgataataaagtaccacaccctcaaggggttggtagtgctccagat
gactccaatacaacagagaaagaagtaatgcctactgaatttgattttaatgaagaagca
gacattgcaaggaaggttttaaagaacttgatcacatcctctgctaaaggaacacttcct
tcttccagtggtggacccacggacctaaattttgatgaaaccattgacgtactgaaaaaa
acatccaatgaatctgaaaaagcatcagatgtaactgaacctgaaaactctagcaaaagc
aaattattaaatcttagaccaatagagtcagaagatgatttgcagagaacaattttcata
agcaacctgccttttgatattgacaaggaagaagttaagcaacaattttccaaatttggt
gaagtgcaatcctttgtccctgttctccatcaagtaaccaagcgaccaaaaggaacaggg
tttcttaagttcaatacagtagctgcagctgatgctgcagtatcagcagcaaaccccaca
tcttctttggggattttcctgaagggcaggcaattgacagctttgaaggctttggacaag
aaatcagctcatgataaggaattgaagaagagcaaacctgaggaacgtgatcaccgcaat
ctttacctggctaaggaaggtctcattgttgaagggactccagctgctgaaggtgtttca
gctagtgacatgtcaaagcgccatatgttggcaagacaaaaagatacaaaattagaatct
ccaaattttcatgtttcaaggactagacttatcatatacaatttgcccaagtcaatgaca
gaaaaagaagttaaaaagctttgtatagatgcagttacctcacgtgctaccaagcaaaaa
cccatgattaaacagataaagtttctgaaggatatgaagaaaggaaaagtagtcacaaag
aaccattcacgaggagttgctttcattgagtttacagagcatcaacatgcacttgtagcc
ctgagagttcttaacaacaatcctgaaacttttggtcctgaacatcgcccaattgtggag
tttgctcttgataatatccaaacattgaggcaaaggagggctaagctggaggcttaccag
cagattaaccatggctatccagaggacttgcagccaaatgatgaccccaacacaccagaa
gccagcccaaacaagaagatgaaatcaagaaaacgtaagtccagggataatgatggacca
ttgaagacttcagaacccaatgaaggagatgaaccagaagataaggtaatcaaaggagct
gtcattgatcgacatggagctgcaaagaaacataagattaatccagcaaaagaaaaacag
aaagacaaacgcaagaagctgaacaattcccatggaatcgggaagcctgatgatgaaaaa
cccttaaaagcagaaagcacaatcagcaaagcccgcaattcaaagtcttcagaggaatca
aatatgctaccaaaaaagaggaagctgcaagagcatatagcagtacaagaagggaaaagc
ccgaaacaaaaaacaaggacccgaaggagtaaagatccatcagggcaggtcatacttgat
aagttggacatgctggtggaacaatatagagctaaattttcacagcagactgatgacaaa
actgatggccaaaaacaaggttccagacagcttaagagatggttccagtcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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