KEGG   Vitis vinifera (wine grape): 100258019
Entry
100258019         CDS       T01084                                 
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit 4
  KO
K11131  H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100258019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vvi03009]
    100258019
   03032 DNA replication proteins [BR:vvi03032]
    100258019
Ribosome biogenesis [BR:vvi03009]
 Eukaryotic type
  Sno RNPs
   Box H/ACA snoRNPs
    100258019
 Prokaryotic type
    100258019
DNA replication proteins [BR:vvi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (animals)
    Dyskerin complex
     100258019
SSDB
Motif
Pfam: DKCLD TruB_C_2 PUA TruB_N UPF0113
Other DBs
NCBI-GeneID: 100258019
NCBI-ProteinID: XP_002270073
UniProt: F6HLD3 A0A438HSP4
Position
8:complement(15739728..15741488)
AA seq 586 aa
MSELELSRSEKKKKKNKSRTEALDVVEFGSDPTQKDGEFLIKPQSFTPSLDTSQWPILLK
NYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVEK
TGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSSVPDVAKVARALETLT
GAVFQRPPLISAVKRQLRIRTIYESKLLEYDPDRHLVVFWISCEAGTYVRTLCVHLGLIL
GVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNYRDESYLRRVIMPLEVVLTSYK
RLVVKDSAVNAICYGAKLMIPGLLRFENEIENGEEVVLMTTKGEAIALGIAEMTTAVMAT
CDHGVVARIKRVVMDRDTYPRKWGLGPRAAMKKKLITEGKLNKHGKPNENTPSEWLRNVV
LPTGGDSMVASLAAAVEPTVKAETDVKEEIDGEQRKRKLNESTDDPVTVPAKKIKKEIEE
VSEFVETEKKEKKKKKKKEKENGDAALSDEEKAVKVKIEEDEDKDEAVTVDKEKSEKKKK
KKKNKEAEDGTASGSPMGISGGDAEADKSEKKKKKKKKNKDAEEED
NT seq 1761 nt   +upstreamnt  +downstreamnt
atgtctgagctcgagctttcgcgttccgagaagaaaaagaagaagaataagagccgtaca
gaagcccttgatgttgtcgaattcggttccgatcctactcagaaggacggtgagttccta
atcaaaccccagagcttcactccttcgttagacacctctcagtggccaatccttctcaag
aactacgaccgtctcaatgtacgcacagggcactacactcctcttccctccggttattcc
cccctcaagcgtcctctggctgagtacatcaggtacggcattctcaatcttgataaaccc
gctaacccatcttctcacgaggttgtcgcttggattaagcgcattctccgagttgaaaaa
accggtcacagcggtaccctcgatcctaaagtgactggaaatctcatagtgtgtatcgat
cgagccacccgccttgtgaaatcccagcaaggcgctggaaaagaatatgtctgtgttgcc
cgtttacactcttcagtgcccgatgttgccaaggtggctcgggcgcttgaaaccctaact
ggagcggtgttccagaggccacctttgatttctgctgtaaaaaggcaacttaggattagg
acgatttatgagagtaagcttcttgagtacgacccagataggcatttagttgttttttgg
atttcttgcgaggcgggaacttatgtaaggacattatgtgtgcatttgggcctgattctt
ggcgtgggagggcatatgcaggagcttcgtagggtgcggtctgggattttgggtgagaaa
gataacatggttacaatgcacgatgttatggatgctcaatgggtttatgataattacagg
gatgagagttatttgagacgggttattatgccacttgaagtggtcttaactagttataag
agattggttgtgaaggattctgctgtgaatgcgatttgttatggtgcaaaattgatgatt
ccagggttgttgagatttgaaaatgaaattgagaatggtgaggaagttgtccttatgact
accaaaggagaggcaattgcattgggcattgcagagatgacaactgctgtaatggcaact
tgtgatcatggtgttgtggcaagaattaagagggtggtcatggatcgggatacttaccca
aggaaatggggcttgggaccaagggcagccatgaagaagaaactgattactgagggaaaa
ttaaataaacatgggaagccaaatgagaatactccttcagaatggttaaggaatgtggtt
ctgcctacaggaggggattctatggttgcaagtcttgcagctgctgtggaacccactgtg
aaggcagagactgatgtgaaggaagagattgatggggagcaacgcaaacgaaaattgaat
gaaagtactgatgatcctgttacagttcctgctaagaagattaagaaggagattgaagag
gtgtcagagttcgtcgaaactgaaaagaaagagaagaagaaaaagaagaagaaggagaag
gagaatggtgatgctgccttatctgatgaagagaaagctgtgaaggtgaagatagaggag
gatgaagataaggatgaagctgtcacagttgataaggagaagtctgagaagaagaaaaag
aagaagaagaacaaggaggctgaggatggcaccgcctctggatcacctatgggcattagt
gggggtgatgctgaggctgataagagtgagaagaaaaagaagaagaagaaaaagaataaa
gatgcagaagaagaggactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (38)   

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