KEGG   Vitis vinifera (wine grape): 100262176
Entry
100262176         CDS       T01084                                 
Name
(RefSeq) tRNase Z TRZ1
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vvi03016]
    100262176
Enzymes [BR:vvi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     100262176
Transfer RNA biogenesis [BR:vvi03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    100262176
 Prokaryotic type
    100262176
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B
Other DBs
NCBI-GeneID: 100262176
NCBI-ProteinID: XP_002273058
UniProt: D7SIF1
Position
17:join(6661114..6661229,6661819..6662032,6663320..6663482,6663635..6663705,6663811..6663906,6664663..6664776,6673883..6673951,6674065..6674139,6674283..6674357)
AA seq 330 aa
MLTFFRLYLQHKSPYLQSTRTHSIIFLQTLCFNPSLSSRRMKNSEANSIVTKKEKGIQIE
GYPVEGLSIGGQETCIILPSLKLAFDIGRCPQRAISQDFLFISHGHMDHIGGLPMYVATR
GLYRMKPPIIIVPKAIKENVEMLFQVHRAMDESELKHNLIGLNVGEEFYLRKDLKVRAFR
TYHVIPSQGYVVYSVKQKLKQEYVGLPGNEIKNLKLSGVEITYTMTTPEIAFTGDTMSDF
ILDHTNVDALMARVLIMESTFVDNTVTVEHAREYGHTHLSEIVSYADRFQNKAILLIHFS
ARYTTDEIQEAVSALPPPLGGRVFALTEGF
NT seq 993 nt   +upstreamnt  +downstreamnt
atgctgacattttttaggctttacttgcagcataaaagcccctatctccaatctacacga
acgcattcaatcatttttctccaaacgctgtgtttcaatccatctctgagttcaaggaga
atgaaaaattcggaggcaaattcaattgtgacgaagaaggagaagggaatacaaatcgaa
ggatacccagttgagggtttgtcgataggagggcaagaaacttgcataatcctcccctcc
ctcaagttagcctttgacattggtagatgtccccagcgtgcaatttcgcaggacttcctg
ttcatttcccatggacacatggatcacattggaggactgcccatgtatgttgcgactcgt
gggttgtatagaatgaagcccccaataattattgtaccaaaagctataaaagaaaatgtg
gagatgctttttcaggtgcacagagcaatggatgagtcagagctgaagcataatctaatt
ggcttgaatgtgggagaagagttttacttaagaaaagacttgaaagtaagagcgtttaga
acctaccatgttataccaagccagggttatgtagtttattctgtaaagcagaaactgaag
caggagtatgttggccttcctgggaatgagattaagaacttgaagttatcaggtgtggag
attacatatacaatgacaacacctgaaattgcctttacgggagataccatgtcagacttc
attctggatcacactaatgttgatgctttgatggcaagagttctcatcatggagagcacc
tttgttgacaacacagtgactgtggagcatgcaagagaatatggccacactcatttgtct
gagatagtcagttatgcagataggtttcagaataaagcaattcttctgatccacttctct
gctcgttatacaacagatgaaattcaagaagctgtctctgcattgcctccgcctttggga
ggtcgagtatttgcactgacagaaggattttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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