KEGG   Vitis vinifera (wine grape): 100265941
Entry
100265941         CDS       T01084                                 
Name
(RefSeq) uncharacterized protein LOC100265941 isoform X1
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100265941
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vvi03019]
    100265941
Messenger RNA biogenesis [BR:vvi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     100265941
SSDB
Motif
Pfam: Rcd1
Other DBs
NCBI-GeneID: 100265941
NCBI-ProteinID: XP_002278722
Position
19:join(7013168..7013347,7026769..7026840,7027371..7027460,7033362..7033404,7035899..7036005,7044277..7044372,7051243..7051433,7051532..7051601,7052329..7052439)
AA seq 319 aa
MANLPQSLSMNAPFGGPPSSAANPAGAQVNKERKLASAENLVLELSNPELRENALLELSK
KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHS
ETRMLFLNAHIPLYLYPFLNTNSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
PLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQQ
STRLLKHIIRCYLRLSDNPRACDALRNCLPDMLKDATFSSCLREDPTTRRWLQQLLHNVG
GSRVAAFQAGGGFDHMLVN
NT seq 960 nt   +upstreamnt  +downstreamnt
atggcgaacctgcctcaatcgctatccatgaatgcccccttcggaggtccgccctcttcg
gcggccaaccccgccggagctcaggtcaacaaggaacggaagttggcgtccgccgagaat
ttggtgctcgaactcagcaatcctgaacttcgtgaaaacgctcttcttgaactctctaag
aagagagaattatttcaagatttggctccattattgtggaattcttttggtactattgct
gcactattgcaggagatagtttcaatttatcctgttctatcaccaccaaatctaactcca
gcacaatcaaatcgggtctgcaatgcacttgcccttctccagtgtgtagcttctcattca
gaaacaaggatgctgttcctaaatgcccacatacccttgtacctgtaccctttcctcaat
accaatagcaaatctaggccttttgagtacttgagactaactagcctaggtgttattggt
gctttggtgaaggttgatgatacagaagttattagtttccttctctcaacagaaataatt
ccgctgtgcctacgcaccatggagatggggagtgaattgtcaaaaacagttgccacattt
attgttcaaaaaattctgttggatgatgtgggcttggattatatttgtactacggcagag
cgattttttgcagtaggtcgagttttggggaatatggtcgcagcacttgctgagcaacaa
tcaacaaggcttcttaagcatattattcgatgttatcttcgattatcagacaacccaagg
gcttgtgatgcattaagaaattgccttccggacatgttaaaagacgccactttcagtagt
tgtcttcgtgaagatccaacaacgaggaggtggttgcagcagctgcttcacaatgttggg
ggaagccgggttgctgcatttcaggcggggggaggatttgaccatatgctggtgaactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (10)   
   RefSeq(nuc) (4)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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