KEGG   Wenyingzhuangia fucanilytica: AXE80_07075
Entry
AXE80_07075       CDS       T04444                                 
Name
(GenBank) RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
wfu  Wenyingzhuangia fucanilytica
Pathway
wfu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:wfu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AXE80_07075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wfu03019]
    AXE80_07075
Enzymes [BR:wfu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AXE80_07075
Messenger RNA biogenesis [BR:wfu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AXE80_07075
SSDB
Motif
Pfam: DEAD Helicase_C ERCC3_RAD25_C ResIII SUa-2TM
Other DBs
NCBI-ProteinID: ANW96052
UniProt: A0A1B1Y5J4
Position
1741310..1742545
AA seq 411 aa
MTFKDLHLNAKILKAVAEQNYTTPTPIQQATIPLVLDGIDVIGCAQTGTGKTAAFALPIL
DRIFSQTDANKKEKKIKALVVSPTRELAIQIEENFKQYSTYTNLRTTSVYGGMSMEPQID
QLTKGVDVLIATPGRLLDLHKRDILNLDYIQILVLDEADMMLDMGFIDDVKKIARLCPQQ
KQTLLFSATMPPKIESLANELLTEPEKVSVSAISSAAKTVSQELYMVPKPKKIELCLHLL
RNDLRGNIIIFRRTKFGVDKLETTLLKNNYKVDTIHGDKTQAARTKALNKFKNNDVNILI
ATDVAARGIDVPDLDIVINFDLPNIPESYVHRIGRTGRAGKEGRALAFCSADEKPYLKDI
QQLLGKLIPVEENHPYPLDPAAKPEVHKKQGSKHKKGRKSQASKAKKKRWY
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgacatttaaagacttacatttaaacgctaaaattttaaaagcggtagcagagcaaaac
tacaccactcctactcctattcaacaagccaccattcctttggttttagatggtattgat
gtaattggttgtgcccaaacaggaacaggaaaaacagctgcatttgctttgcctatttta
gacaggattttttctcaaacagatgctaataaaaaagagaaaaaaattaaagccctagta
gtaagtcctacgagagaattggccatacaaatagaggaaaactttaaacaatatagtact
tataccaatttaagaactacttctgtttatggaggaatgtctatggaacctcaaatagat
caattaaccaaaggagtagatgttttaattgccactcctgggcgtttgttagatttacat
aaaagagatattttaaacctagattatattcagattttggtcttagatgaagctgatatg
atgttagacatgggctttattgatgatgtaaaaaaaatagctcgtttatgtccgcagcaa
aaacaaactttgctgttttctgcaaccatgccaccaaaaattgaatcattagccaatgaa
ttgttaacagaacctgaaaaagtatcggtttctgctatttcatcggctgctaaaactgtg
agtcaagaattgtacatggttccaaaacctaaaaaaattgaattgtgcttacacttacta
agaaatgatttacgaggaaatatcattatttttagacgtactaagtttggtgtagataaa
ttagaaaccaccttattaaaaaacaattacaaggtagatactattcacggagacaaaaca
caagcggccagaacaaaagccttaaataaatttaaaaacaacgatgttaatatattaatt
gctactgatgttgcagccagaggtattgatgtcccagatttagatatagtgatcaatttt
gatttgccaaatattccagaaagttatgtacacagaattggtcgtactgggcgagctgga
aaagaaggaagagcattggctttttgttcggctgatgaaaaaccttatttaaaagacata
caacaacttttaggtaaattaattcctgtagaagaaaatcatccttatcctttagatcct
gctgcaaaaccagaggttcataaaaaacaaggaagtaaacataaaaaaggacgaaagtct
caagcttctaaagctaaaaagaaacgttggtattaa

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