KEGG   Wallemia ichthyophaga: J056_003868
Entry
J056_003868       CDS       T03457                                 
Name
(RefSeq) Exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
wic  Wallemia ichthyophaga
Pathway
wic03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:wic00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    J056_003868
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wic03019]
    J056_003868
Messenger RNA biogenesis [BR:wic03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     J056_003868
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 20376820
NCBI-ProteinID: XP_009267352
UniProt: R9AHH2
Position
Unknown
AA seq 258 aa
MNFDRRRVNGPEITSDVFYANESPQFTKNEREIRKVDEMRPIFLKPGLISSASGSTYFEA
GNTKIACAVYGPKQIKNAAYSPTGRLNVEIKHSPFSSPVRRDAVRELDATHLSNQVTQSL
LPSLRLDEYEKMQIDVFVTILEDDSLDFGLMGCITTAAGCALASAGLEMNGLVVGVALAI
QSDRLLVDPTPSEVRESQGMMTVCTLPALTQITHIWQAGMLDLGGYKQALSIAESASRNI
HTVIAKTLMNEAAISDDK
NT seq 777 nt   +upstreamnt  +downstreamnt
atgaatttcgacaggaggagagtaaatggtcctgagatcacctctgatgtattctacgct
aatgaatctcctcaatttaccaaaaacgaacgcgaaatacgtaaagtggacgaaatgagg
ccaattttccttaaacctggtttgatttcttctgcgtctggttccacctactttgaggcg
ggtaatacaaagatagcgtgcgcagtgtatggaccgaagcagataaagaacgccgcgtat
tctcccaccggcaggctcaatgtggagataaagcactctccgttcagctcgccagtgcga
cgtgatgctgttagagagctagacgcgacacacctcagcaaccaggtcacacagtctctt
ctccccagtcttagactagacgagtacgagaagatgcagatcgatgtctttgtgaccatt
ttagaggatgattcactcgatttcggtttgatgggatgtattacgacggcggctggatgc
gcgttggcgagcgcgggattggaaatgaatgggttagttgtaggagtggcgttggctatt
caatcagataggttgcttgtcgatccaacaccgtcagaagtcagggaatcacagggaatg
atgacagtgtgcactctgccagcactaacacagataacacacatatggcaagcaggaatg
ctcgatttagggggttataagcaggcgctgtctattgcagaaagtgcttcacggaatata
cacacggtgatagctaagacattaatgaatgaggcagctatatcagatgataagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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