KEGG   Winogradskyella sp. J14-2: BWZ20_04600
Entry
BWZ20_04600       CDS       T04714                                 
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
wij  Winogradskyella sp. J14-2
Brite
KEGG Orthology (KO) [BR:wij00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:wij03009]
    BWZ20_04600
Enzymes [BR:wij01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     BWZ20_04600
Ribosome biogenesis [BR:wij03009]
 Prokaryotic type
  ribosomal protein modification factors
   BWZ20_04600
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM_2 TMF_TATA_bd CLP1_P TRAM
Other DBs
NCBI-ProteinID: APY07621
UniProt: A0A1P8RUT4
Position
complement(977022..978326)
AA seq 434 aa
MRTKTLKKNRINVVTLGCSKNVYDSEVLMGQLKASGKDVVHEQDGNVVVINTCGFINNAK
EESVNTILEFMQKKEAGEVDKVFVTGCLSERYKPDLQKEIPNVDQYFGTTELPSLLKALG
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGKHKSTPIEDLVVEAEKLA
ANGVKELILIAQDLTYYGLDLYKKRNLAELLENLVKVDGIEWIRLHYAFPTGFPMDVLDI
MKREPKICNYLDIPLQHISDAILKSMRRGTTQEKTTKLLKAFRAKVPEMTIRTTLIVGYP
GETEEDFQTLKQWVKDMRFERLGCFTYSHEENTHAFNLEDDVPEDVKMQRANEIMEIQSQ
ISWELNQAKIGQEFKVVIDRKEGNYFVGRTEFDSPDVDNEVLIDATNTYLKTGEFTTVKV
IEAEDFDLYGEVVS
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgcggactaaaactttaaagaaaaatagaatcaacgtagtaacgcttggctgtagtaaa
aatgtttacgatagcgaagtgttaatggggcagctaaaagcgagtggtaaagatgtggta
cacgagcaagacggtaatgttgtggtgattaacacctgtggttttattaataatgcaaag
gaagaaagcgtaaacaccattttagagtttatgcaaaaaaaggaagctggagaagttgat
aaggtttttgttacaggctgtttaagcgagcgctataaacccgatttacaaaaagaaatc
ccaaacgtagatcagtattttggtactacagagctcccaagtttacttaaagccttgggt
gccgattataagcacgaacttataggcgaacgcttaaccacaacaccaaaaaactatgcg
tatttaaaaattgccgaaggttgcgacagaccatgtagtttttgtgctattccgctaatg
cgtggtaaacacaaaagtacaccaatagaagatttggtggttgaagccgaaaaattggct
gccaatggtgtaaaagaattgattcttattgcacaagatttaacctattatggcctagat
ttatacaaaaaacgaaatctcgctgaattacttgaaaatcttgtaaaagttgatggtatt
gagtggattcgactgcattatgccttcccaacagggtttccgatggatgtgttagatatt
atgaaacgcgaacctaaaatttgcaactaccttgatataccgttgcaacacatttcagat
gcaattttgaaaagtatgcgtcgtggcactacccaagaaaaaacaacaaaactgttgaaa
gcatttagggcaaaagtgcctgaaatgaccataagaaccactttaattgttggctatcct
ggtgaaaccgaagaagatttccaaacattaaagcaatgggtgaaagacatgcgttttgag
cgtttgggctgttttacctattcgcacgaggaaaatacacatgcattcaatctagaggat
gatgtacccgaagatgtgaaaatgcagcgcgctaacgagattatggaaattcaatcccaa
atttcgtgggaactcaaccaagccaaaataggccaagaatttaaagtagtaatagatcga
aaggaaggcaattattttgtgggtcgtacagaatttgattcgccagatgtggataacgag
gtattgattgatgctaccaatacataccttaaaacaggtgaatttacaactgttaaggtc
attgaagctgaggattttgatttgtatggtgaggttgtatcttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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