KEGG   Weissella koreensis: WKK_04315
Entry
WKK_04315         CDS       T01577                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
wko  Weissella koreensis
Pathway
wko03030  DNA replication
wko03430  Mismatch repair
wko03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:wko00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    WKK_04315
   03430 Mismatch repair
    WKK_04315
   03440 Homologous recombination
    WKK_04315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:wko03032]
    WKK_04315
   03400 DNA repair and recombination proteins [BR:wko03400]
    WKK_04315
Enzymes [BR:wko01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     WKK_04315
DNA replication proteins [BR:wko03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     WKK_04315
DNA repair and recombination proteins [BR:wko03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     WKK_04315
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA RuvB_N DNA_pol3_gamma3 AAA_30 AAA_22 AAA_5 TIP49 AAA_24 AAA_19 AAA_14 AAA_assoc_2 AAA_7 PIF1 Mg_chelatase AAA_18 AAA_16
Other DBs
NCBI-ProteinID: AEJ23736
Position
906743..908482
AA seq 579 aa
MAYQALYRTWRPQKFADMVGQEVVTKTLRNALITEQISHAYLFTGPRGTGKTSAAKIFAK
AVNCLHPVDGEADGTCEICQAIDQGTLGDIIELDAASNNGVDEIREIREDVNYAPTLAKY
KVYIIDEVHMLSTGAFNALLKTLEEPPANVIFILATTEPQKIPATIISRTQRFDFKRIDA
NAAYERMVYILNQRGNNYDDTAVKVIANAADGGMRDALSILDQALSFGNGNVTLDNALLV
TGSVTQTLLGEYVMALVEHDSKRALAKLTEVLTDGKDAGRFIEDLISYARDLLLNTEAPD
LISLVPDDNFKQLAQEQKADTWYQMIDVLSETQQQLRFTNRPSIYLEVLTVKLSRLNQAG
VAEPQAVVAGNSATNVHANTEATLKPLDDSNDGTVIETDNVAPVAEQPIRIAHKASTEKK
HIFEVLDAATRGDLNRLQAAWADILAQLNVSQKAILSTAKPVAASSNGVLLGFDFEIFRD
KTKKDQGLVDLLNEQIRKLTESKDERNLVLVTNEEWPDIRNQWIQQHRKNKPATESAAAP
EAELAATDIPEQNESTQDQTIVQAAKDLFGDELVEVKAD
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggcttatcaagcactttatcggacctggcgtccacaaaaatttgccgatatggttggt
caagaggtggttacaaagaccctccggaatgctttaataactgaacaaatttcgcatgct
tatctatttactggacctcgaggaacaggaaaaacttctgcggccaaaatttttgcaaaa
gccgttaattgtttacatccagttgatggtgaggctgatggaacttgtgaaatttgccag
gcaattgatcaaggaacattaggtgatattatcgaattagatgctgcatctaataatgga
gtggatgaaatccgagaaatccgagaagatgttaattatgcacctactttggctaaatat
aaggtctatatcattgatgaggttcatatgttgtcaacgggggcatttaatgctttattg
aaaactttggaagaaccaccagcaaatgttatttttattttagccactacggaaccacaa
aaaattccggcaacgattatttcaagaacacaacgatttgatttcaaaagaattgatgcc
aatgcagcctatgaacggatggtatatattctaaatcaacgtggtaataactatgatgat
acagcggttaaggtcatagctaatgccgctgatggtggaatgcgtgatgccttgagtatt
ctggaccaggccctttcttttgggaatggaaatgtaacactggacaacgctctcttagtg
actggatcggtaacacaaactttgttgggtgaatatgtcatggctttggtagaacacgat
tctaaacgagctttagctaagttaacagaggtgttaactgacggtaaagatgctggacgt
tttattgaggatctaatcagttatgcccgcgacttattgttgaatactgaggcacctgat
ttaatttcattggtacctgatgataattttaaacaattggcccaagagcaaaaggctgat
acttggtatcaaatgattgatgtacttagtgaaacccaacaacaactacgatttactaat
cgtcctagtatttacttggaagtattaaccgttaaattgagtcgtttaaaccaggctgga
gttgctgaaccacaagcagtggtagcaggaaattccgccacaaatgtacacgcaaatact
gaagctacgctgaaacccttagatgattccaatgatggtactgtgattgagaccgataac
gtcgcacctgttgctgagcagcctattagaattgcacataaggcaagtacagagaagaag
catatttttgaagtgctagatgctgccacacgtggtgatttgaatcgtttacaagcagct
tgggcagatattttagctcaattgaatgtttcacaaaaagctattcttagtactgctaaa
ccggtggccgcttcgtcaaacggtgtacttttaggttttgactttgaaattttccgtgat
aaaaccaaaaaagatcaagggctggttgatcttttgaatgaacaaattagaaagttaact
gaaagtaaagatgagagaaacttggtcttagtgaccaacgaagaatggccagatatacga
aatcaatggattcaacaacatcgcaaaaataaaccagcaactgaaagtgcagcagcaccg
gaagctgaattagcggccactgatattccagaacaaaatgagagcacccaagatcaaacg
attgtgcaagccgctaaagatttatttggggatgagttagttgaagtgaaagctgattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (39)   

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