KEGG   Wallemia mellicola: WALSEDRAFT_21205
Entry
WALSEDRAFT_21205  CDS       T03142                                 
Name
(RefSeq) DNA mismatch repair protein Msh6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
wse  Wallemia mellicola
Pathway
wse03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:wse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    WALSEDRAFT_21205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:wse03400]
    WALSEDRAFT_21205
DNA repair and recombination proteins [BR:wse03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     WALSEDRAFT_21205
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV Sec8_N AAA_29 BAR_3_WASP_bdg AAA_22 AAA_30 AAA_27 ABC_tran
Other DBs
NCBI-GeneID: 18470878
NCBI-ProteinID: XP_006959847
JGI: Walse1_21205
UniProt: I4Y834
Position
Unknown
AA seq 1017 aa
MDEDIKDAPVEEESDDLIEEIDLEDIEKSKQAPKPKPAPKETPAKAARPSAAGRTPSGGN
KSLLTKAERQVQQTKAAKKDAESPFMFLHPPYDKYQNPIGHPDYDPHTLHIPPKYWKEFS
PFEKQFWEIKADHFDTILFFQKGKFYELYENDAIIGHREFDLKLTERVRMCMVGVPEMSF
DFFAAKFLALGYKVGKVEQRETAIGMDMRQRADKKPAGGAKAGKSDDKLVRRELRSVLTN
GTLVDPKMLADEAASHCVSIKETSSSINGNKPTFGLCILDASTGEFNLATFEDDKSRSKL
ETLIRQLRPKEIVHEKGNLDQLTLRVLRNITSISCLWTSLNSGKEGMDAIETITELKNLF
NKDNEDADKVKLPDAIESLIENTEAIESLGNLMWYLRSLNLDRDLLSLGNFNIYDATREG
QAMILDGRTLAHIEVLVNSEGGEDDTLLKLLNRCTTPFGKRLFRIWLCTPLRSSKAINER
LNAVDDVISNTGFTQEFDSNVKGLPDLERLLSRIHAMSVRPKQFLQVLEAFNRLQQVFEK
LEEEASEFKSQSLKATLRSIPDLREYISNIESKFDLTENDTLMPCDGADEAYEDAKKLNE
DLEQELDEILERYKREFKIKTISYKDVGTKEIYSIEMPKKTSVPANWAKLSSTQKVDRYW
SPEVRQLVQKVKEARETRASALNDFAKKLYAAFDEDYKTWIAAVKACAEIDCINSLAKSS
INMEEPRCRPTIIEADEAIIDFDQLRHPSMALRRDFVANDVKLGGNDEGTMLLTGPNMAG
KSTLLRMTAAAVIMAQIGCYVPAQSATIAPVDRIASRLGAYDNMFSNSSTFMVELAETSK
IVNETTPKSLLILDELGRGTSTTQGIAIASAVLQHIASFLGCCLFSTHYSSLGDFGSTHP
NIKACHMASEVNSEKREIRFLYKLVEGVALDSYGHHVAKLAGVPLPVVVRAEQVATEYTE
ANKLEQEKAEAKRHKTIPLAAQSDFATMIRLARQGANELTFRDKRNLRFISEANKVN
NT seq 3054 nt   +upstreamnt  +downstreamnt
atggatgaggatattaaagacgcgccagttgaagaggagagtgacgacctaattgaggaa
attgatttagaagatattgaaaagtctaaacaagcgcctaagccaaagccagcaccgaaa
gagacacctgcgaaggcagccagaccgtcagctgcaggacgcacaccctcaggcggtaac
aagtcacttcttacgaaagctgagcgtcaagtgcagcagacaaaagctgctaagaaggac
gctgaatcaccattcatgttcttgcacccgccatatgataaataccagaaccctattgga
catcccgactatgatccacacacattacatatccctccaaagtactggaaagaattttca
ccattcgagaagcagttctgggaaatcaaggctgatcactttgacacaattttgttcttt
caaaagggtaaattctacgagctttatgaaaatgatgctattattgggcaccgagaattc
gatttgaagttgacggaacgtgtcaggatgtgcatggttggtgtaccagagatgtctttc
gacttcttcgccgcaaaattcttggcattgggttacaaagtaggtaaagttgaacagcgt
gaaacagcaattggtatggatatgcgtcaaagagcggacaagaaaccagcaggtggagct
aaagcaggcaaatctgatgacaaactcgtccgtcgtgaattacgttccgtattgacgaat
ggtacattggtagatccaaagatgttagctgatgaggcggcatctcattgtgtatccatc
aaggagactagcagtagtatcaatggtaacaaacctacgtttggcttatgtatcttggac
gcaagtactggtgagttcaatctcgccacttttgaagacgacaagtcgagatcaaaactg
gagacattgattagacaattacgtcctaaagaaattgttcatgagaaagggaatctcgac
caactcactttacgtgtcctccgaaacattacgtctatttcatgtttgtggacatcactt
aactccggcaaagagggaatggacgcgattgaaactataactgaactgaagaacttgttt
aataaggataatgaagatgctgataaagttaaactacctgatgctatcgagagcctcatt
gaaaataccgaggctattgagtctttgggtaacttaatgtggtatcttcgttcactaaat
ctcgatcgtgatttgttatcgctcggtaatttcaacatttacgacgctacacgtgaaggt
caagccatgatattggatggtcgcacattagctcatattgaagttcttgttaatagtgaa
ggcggtgaagatgatacattgttgaagttgctcaacagatgcactacgccatttggtaaa
cgtctatttagaatctggttatgtacgccccttcgctcttccaaagctatcaatgagcgt
ctcaatgcagtcgatgatgtgatatcgaatactggatttactcaagaatttgatagtaac
gtgaagggtttacctgatttagaaagactgctttcaagaattcacgctatgtccgtacgt
ccaaaacagttcttacaggttttggaggctttcaacagacttcaacaagtgtttgagaag
ttagaagaagaagcgagtgaatttaaatcgcagtctcttaaagctacactcagatctata
cctgatctcagagaatatatatcaaatatcgaatcaaagttcgatttaaccgaaaatgac
acgcttatgccatgcgatggtgctgatgaagcttacgaagatgctaagaagcttaatgaa
gatttagaacaagaacttgatgagatcttagagaggtataaacgcgaattcaagattaag
actataagttacaaagacgtcggtactaaagagatatactctattgaaatgccgaaaaag
acatctgttcctgctaactgggcaaagttgtcgtcaacacaaaaggtagacagatattgg
tcacctgaagtccgtcaactcgtacagaaagttaaagaagcaagagagacacgtgctagt
gctttgaatgactttgctaagaagctctacgcagcattcgatgaagattacaagacatgg
atagcagctgtcaaagcttgtgctgaaatagattgcattaattcgctggcaaaatcatcc
atcaacatggaagaacctagatgccgaccaaccattatagaagcagatgaagccatcatt
gactttgatcagcttcgccatccttcaatggctctcagaagagatttcgttgctaatgat
gtcaaacttggtggtaacgatgagggtacaatgttattaactggtccgaatatggctggt
aaatccacgctccttcgtatgactgcagctgctgtcatcatggcgcagattggttgctac
gttcctgctcaaagtgctactattgcccctgtcgataggattgcaagtagacttggtgct
tatgacaatatgttcagcaactcgtcaacattcatggtagagttggcagaaacctctaag
atcgttaatgaaaccacgccgaagagtttgttaattttggatgaattgggaagaggtaca
tctacaacgcagggtattgcgatcgcaagtgcggtattacaacacattgcctcatttttg
ggttgctgtttgttctccacccattattcaagtttaggtgactttggatctacacatcca
aacatcaaagcctgtcatatggcttctgaagtgaatagtgaaaagagagaaatacgcttc
ctctataagcttgttgaaggtgttgcacttgatagttatggtcatcatgtcgctaaactt
gctggtgtaccacttccagttgtagtcagagctgaacaggtagcaactgagtatacagag
gctaacaaactggagcaagagaaggcagaagctaaaagacacaaaactatccctcttgca
gctcaatctgactttgcaacaatgattagattagcaagacaaggtgcaaatgagctgaca
tttagagataaacgcaatttaagattcatcagtgaagcaaacaaagtaaattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (56)   

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