KEGG   Xanthomonas citri pv. citri mf20: J172_03073
Entry
J172_03073        CDS       T03781                                 
Name
(GenBank) Type I site-specific restriction-modification system, R (restriction) subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
xcf  Xanthomonas citri pv. citri mf20
Brite
KEGG Orthology (KO) [BR:xcf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:xcf02048]
    J172_03073
Enzymes [BR:xcf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     J172_03073
Prokaryotic defense system [BR:xcf02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   J172_03073
SSDB
Motif
Pfam: SWI2_SNF2 ResIII HSDR_N DEAD AAA_16
Other DBs
NCBI-ProteinID: AJZ09615
Position
complement(3399389..3402643)
AA seq 1084 aa
MHPAFTDTAHREKYFETYIVKQLAARGWKIGDTNDYDQNHALYPEDLVAWIQTTQPSRWE
KLVASNGEKAVTTLMDRLAQALDKEGTVHILRHGVKIAGAGEISLSEGLPEDARDPSAWD
RYNANILRVVPQLKYRPGSTLAIDLVFFINGLAVATVEVKTDFTQSASAAVEQYKNDRLP
VDPTTSRVEPLLIFKRGAVVHFAMSDSDIQMCTKLDGQNSYFLPFNQGRDGRAGNPIRED
GEYPVAHFWEQVCQRDNWLRIFHGFVYTEKKDVVDVAGNHSRKETQIFPRFHQWKAVTRM
IDDAKAKGPGQSYLCEHSAGSGKTSTIAWTAHDLIRLRTDAGVNLFHSVIVVTDRTVLDK
QLQYAVQQIDHQKDLIAAIGEKDSGVSKSKELAEALERGTPIIVVTIQTFPYAMEQILTN
GKLADRNFAVIIDEAHTSQTGTAASKLQATLALRDAKAMEGLTVEELLEKIQSSRVRPNN
VSYFAFTATPKHATLTLFGTRPDPGKPASKEDNLPVSFDKYPMRQAIEEGFILDVLQGYL
PYKTAFNMAEPEKDGKRVEGKAAKRALAKWLSLHATNVTQKVEFIVEHFAANVAPLLGGT
AKAMIVTSSRAAAVRYKKAFDAYIRANPQHKPYQALVAFSGSLTGNEVMHASDEQLKNDP
FAAQDDEQFTESTMNPRQYGTDLRKVFDRPEFRVMIVANKFQTGFDQPKLCAMYLDKKIA
NPVEIVQTLSRLNRTAPGKDTTFVVDFVNDPQSILDAFAMYDAGAKIEKAQDPNVVYDLQ
ADLDKVGVYTQREVETYTAIRFKSAAAYAAGEKAQHKDMYAATSLPTQRFNDALKAARTA
IQAAEADFEGAKAQGNEAGMKAADARRNAAAEVLQKLLDFKSGLSRFGTLYTYIAQTIDF
GDPSLEGFASFARLLSKRLNGVPPDQVDICALLLTGFDIKSQDKPALGGDDGDDQKLILK
PVGPGGGGQAQLPVYLRQVIAKLNSIFGEATALTDKLALVNHVADIVREDANTVAQVKNN
PRDVAMAGNIKGSVQSALVRALDSHSTLAAHVLKHDQQALVPLVGLIYELVKAGQNIDRT
ELGA
NT seq 3255 nt   +upstreamnt  +downstreamnt
atgcatcctgccttcaccgacaccgcccaccgcgagaaatacttcgagacgtacatcgtc
aagcaactcgccgcgcgcggctggaagataggcgataccaacgactacgaccagaaccat
gcgctctacccggaagaccttgtggcatggatccagaccacacagccttcgaggtgggaa
aagctggtggcgagcaatggcgaaaaggcggtcaccactctcatggaccgccttgcccag
gccttggacaaggagggcaccgtccacatcctgcgccatggtgtgaagatcgcaggggca
ggcgaaatcagtctgagcgaaggcctgcctgaggacgcgcgcgatccgtcggcctgggac
cgctacaacgccaacattctgcgcgtggtgccgcagttgaagtaccgccccggcagcacg
cttgccatcgacctggtgttcttcatcaacggtcttgcggtggcgaccgtagaggtcaag
accgacttcacccagtccgcctcggctgctgtcgagcagtacaagaacgatcgactgccc
gtggatccaaccacgagccgcgttgaacccctgctgatcttcaagcgtggcgccgtcgtt
cacttcgccatgtccgacagcgacatccagatgtgcaccaagctggatggccagaactcc
tacttcctacccttcaaccaaggccgggacggtcgggcgggcaaccccatccgcgaggac
ggtgagtatccggtcgcccacttctgggagcaggtctgccagcgcgacaactggctgcgg
atcttccatggcttcgtgtacaccgaaaagaaggacgtggtggacgtggctggcaaccac
tcccgcaaggagacgcagatcttcccgcgcttccaccagtggaaagcggtcacccgcatg
atcgacgacgccaaggccaagggccctggccagtcctacctgtgcgaacactcggcaggc
tccggtaagaccagtaccatcgcctggacggcgcatgacctgatccgcctgcgcaccgat
gctggcgtcaacctgttccactcggtcatcgtggtcaccgatcgcacggtgctcgacaag
cagctccagtacgcagtccagcagatcgatcatcagaaggatctgatcgcggccatcggg
gagaaggacagcggcgtcagcaagtccaaggaacttgccgaagctctggaacgtggcacc
cccatcatcgtggtgaccatccaaactttcccttacgcgatggagcagatcctgaccaac
gggaaactcgctgaccgcaacttcgccgtaatcatcgacgaggcccacaccagccagacc
ggcaccgccgcctccaagctgcaggccacgcttgccctccgcgacgccaaggccatggaa
ggactcaccgtcgaggagctactggagaaaattcagtcctcgcgcgtgcgccccaataac
gtctcctacttcgcgtttactgccacgccgaagcacgccacgttgacgctgttcggcacg
cgccctgatccgggcaagccggctagtaaggaggacaacctgcccgtgtccttcgacaag
tacccgatgcgccaggccatcgaggaaggcttcatcctcgatgtgctgcagggctacttg
ccctacaagacggcgttcaacatggccgagcctgagaaggacggcaagcgcgtggagggt
aaggcggccaagcgggcgctggccaagtggctctcgctccatgccacgaacgtcacccag
aaggtcgagttcatcgtcgagcacttcgcggccaacgtagcccctttgctggggggcacg
gctaaggccatgatcgtgacgtcctcgcgcgcggccgccgtgcgctacaagaaggcattc
gacgcgtatatcagggccaacccgcagcacaagccctaccaagcgctggtggcgttctcc
ggctcactcacgggcaatgaggtcatgcacgcctccgacgagcaattgaagaacgacccg
ttcgcggcgcaggacgatgagcagtttaccgaaagcaccatgaaccctcgtcagtacggt
accgacctgcgcaaggtgttcgatcgtcctgagttccgggtcatgatcgtggccaacaag
ttccagaccggcttcgaccagcccaagctgtgcgcaatgtacttggacaagaagatcgcc
aacccggtggagattgtccagacgctctcccgactcaaccgcaccgcgcccggcaaggac
acgaccttcgtcgtggacttcgtcaacgatccgcagtcgatcctcgacgccttcgccatg
tatgacgcaggcgccaagattgagaaagcgcaagatcccaacgtggtctatgacctgcaa
gccgacctggacaaggtgggggtctacacgcaacgcgaggtagagacgtacacggccatc
cgcttcaagtcagccgcggcctacgccgcaggcgaaaaagcccagcacaaggatatgtac
gcggccactagcctgcctacccagcggttcaacgatgcgctgaaagccgcccgcaccgcc
atccaggccgcggaggcagacttcgagggcgccaaggcacaggggaacgaagccggtatg
aaggcggccgacgcacggcgcaatgcggcggctgaagtgctccagaagctactggacttc
aagtcggggttgtcccggttcggcactctgtacacctatatcgcccagaccatcgacttc
ggcgaccccagcctggaaggattcgccagcttcgcccgcctgctgtccaagcgcttgaac
ggtgtgccgcctgatcaggtggacatatgcgcgttgctgctgaccggcttcgacatcaag
tcgcaggacaagcccgccttgggtggtgatgacggtgatgatcagaagctgatactgaag
cccgtaggccctgggggcggtgggcaagcgcagctacccgtctacttgcgtcaggtgatc
gctaagctcaactcgatcttcggtgaggccacggcactgaccgacaaattggccctggtg
aaccacgtcgccgacatcgtgcgcgaggacgccaacaccgtggcccaagtcaaaaacaac
ccgcgggatgtggccatggcaggcaacatcaaaggctcagtccagtcggccttggtcagg
gcattggactcgcacagcacgctggccgcccatgtgttgaagcacgaccagcaggcactg
gtcccgctggtggggctgatctacgagttggtcaaggcggggcagaacatcgaccggacg
gaactgggggcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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