KEGG T05908: 114147575

Xiphophorus couchianus (Monterrey platyfish): 114147575

Entry

114147575         CDS       T05908

Name

(RefSeq) probable E3 ubiquitin-protein ligase makorin-1

K15687

E3 ubiquitin-protein ligase makorin [EC:2.3.2.27]

Organism

xco Xiphophorus couchianus (Monterrey platyfish)

Brite

KEGG Orthology (KO) [BR:xco00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xco04121]
    114147575
Enzymes [BR:xco01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     114147575
Ubiquitin system [BR:xco04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    114147575

SSDB

Motif

Pfam:

zf-CCCH_4 zf-RING_2 Torus zf-CCCH zf-C3HC4 zf-rbx1 zf-CCCH_3 zf-C3HC4_4 zf-RING_UBOX zf-RING_5 zf_CCCH_4 zf-CCCH_2 zf-RING_11 zf-C3HC4_2

Other DBs

NCBI-GeneID:

114147575

NCBI-ProteinID:

XP_027877859

Position

1:complement(14008225..14012460)

AA seq 352 aa
MDSVRSGNICRRFINGSCRFGRRCKYRHEFTPIPASQICRYFQKGGCWYGERCRFFHVLL
PQVGPVFPGRRGSVPVASPSGMPHYSERRGSEPSLWRFNVPSRHRCSGSQSAIYPFNLQQ
ETGNLPEYVLEELSQENYLESAPSSGIAEASAWQGRYERASKSETCEDGAAAACNEKSEE
TLAFLQSKNVVCGICMDKVYEKENQRDRVFGILPNCNHPFCLDCIATWRKTKDIGLDVVR
ACPQCRVRSAFYVPNKYWVEGQEKETVIGAFKKKFGKKRCCFYDRYGCCPFKKECLYRHV
GDSTNSPVFSYLSEEEDDNFTDLLGFFISMSLLGGEEADEELLFCLTEDYGF

NT seq 1059 nt +upstreamnt +downstreamnt
atggactcggttcgtagtggaaacatttgtaggcgcttcataaatggctcttgcagattt
ggccgaaggtgcaagtacagacatgagttcacccctatacctgcatcccagatatgtcgg
tactttcagaaaggtggctgctggtatggtgaacggtgcaggttctttcatgtccttctg
cctcaagttggaccagtgtttccaggaagaaggggttcagtgcctgtagcctccccctct
ggtatgccccactactctgaaagaagagggtcagaaccatctctttggcgctttaatgtc
ccatccaggcacagatgcagtggatcacagtcagcaatttatcccttcaatcttcagcaa
gaaactgggaatctgccagaatatgttttggaggaactgtcacaagaaaattatttggag
tcagccccaagttcaggaattgctgaagcaagtgcatggcagggaagatatgagagagcc
tctaaatccgaaacatgtgaagatggagctgcagcagcttgcaatgaaaaaagtgaagaa
actttggctttcctgcagagcaaaaatgtggtctgtgggatctgtatggacaaagtctat
gaaaaggagaatcagagagaccgggtctttgggattttgccaaactgcaatcatcccttt
tgtttagactgcatcgcaacctggaggaaaacaaaagacatcggacttgatgtcgtaagg
gcttgtcctcagtgtcgagtcaggtctgctttttatgtgccaaataaatactgggtggaa
ggtcaagagaaggaaactgtaattggtgctttcaagaaaaaatttggtaagaagagatgc
tgcttctatgaccgatatggatgctgtcccttcaaaaaggagtgtctctatcggcatgtt
ggagattctactaacagtccagtgttttcatacctctcagaggaagaggatgacaatttt
actgatctgcttggttttttcataagcatgagccttcttggtggtgaagaagcggacgaa
gaacttctcttttgcctcactgaagattacgggttttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (24)   

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