KEGG   Xanthomonas campestris pv. raphani: XCR_0149
Entry
XCR_0149          CDS       T01872                                 
Name
(GenBank) type IV secretion system protein VirD4
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
xcp  Xanthomonas campestris pv. raphani
Pathway
xcp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:xcp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    XCR_0149
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xcp02044]
    XCR_0149
Enzymes [BR:xcp01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     XCR_0149
Secretion system [BR:xcp02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   XCR_0149
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind EAP30
Other DBs
NCBI-ProteinID: AEL05079
UniProt: G0CIF4
Position
complement(168995..170575)
AA seq 526 aa
MPLHWDTYWSYVKALDLPQFAPYASKIKLAGALGFGVPLLAWIALLIPLFKPKAAALHGD
ARFASGSELAKKDMLKPSPTGIVVGKHGGKLVRLPGQQFVILAAPTRSGKGVGIVIPNLL
DYQGSVVVLDIKQENFDLTSGWRKSQGQEVFLFNPFAEDGRTHRWNPLSYISPDPAFRVS
DLMSVAAMLYPDGSDAQKFWVSQARNAFMAFTLYLFDSLDDQIKRKHPKDTWMFPTLGML
YRVSSGDGSDLKGYLKKLSQREFLGRDAKTAFDNLLSQAEETFASIMGTFKEPLNQFINP
ILDASTSDNDFLLTDVRKKKMSIYIGIQPNKLAESRLLINLLFSQLINLNTKELPQNNPV
LKHQCLLLMDEFTSIGRVDIIASAVSYMAGYNIRLLPIIQSMAQLDATYGKDVSRTIITN
HALQIVYAPREQHDANDYSDMLGYTTVRKKNKSHTSGKQSSVSYSETEQRRALMLPQELK
AMGFDKEVFLYEGIPSPVLCEKIKYYEDAYFTKRLLPKVSVQTLKI
NT seq 1581 nt   +upstreamnt  +downstreamnt
gtgccgctccactgggacacctactggtcttacgtcaaagcgctcgacctcccgcagttc
gctccctatgccagcaagatcaagctggccggcgccctcggctttggcgtgccgctgctg
gcctggatcgcgctgctgatcccgcttttcaagccgaaggccgccgccttgcatggcgac
gcgcgctttgcctcaggcagtgagctggccaagaaggacatgctcaaaccgtcaccaacc
ggcattgtggttggcaagcacggcggcaagttggtgcgcttgcccggtcagcagtttgtg
atcctggccgcgcccacgcgttcgggcaagggggtgggcatcgtcattcccaatttgctc
gactaccaaggatcggtggtggttctggacatcaagcaggagaatttcgacctgacctcg
ggttggcgcaagagccaaggccaggaagtctttttgtttaacccgttcgcggaagacggg
cgcacccaccgttggaacccgctcagctatatctcaccggatccggcgtttcgcgtgtcg
gatctgatgagtgttgcggcgatgctctacccggatggctccgacgcccagaagttctgg
gtgagccaagcccgcaacgccttcatggcgtttacgctctatctgttcgatagcctcgat
gatcagatcaagcgcaagcaccccaaagacacctggatgtttccaacgcttgggatgctc
tatcgcgtgtcgtcgggagatggcagcgacttgaagggctacctcaaaaagctctcgcag
cgcgaattcctgggtcgtgacgcaaagacagcctttgacaatttgctctcgcaagccgaa
gagaccttcgcctcgatcatgggcacgttcaaagaaccgctcaaccagttcatcaacccg
atcctggatgcatcgaccagcgataacgattttttgctgaccgatgtgcgcaagaagaag
atgagcatctacatcggcatccagccgaacaagctggccgaaagccgcttgttgatcaat
ctgctgtttagtcagctcatcaacctcaacaccaaagagctgccgcagaacaacccggtg
ctcaaacaccagtgcttgctgttgatggatgagttcacgtccatcggcagggtcgacatc
atcgcaagcgcggtgagctacatggcaggctacaacattcgcttgctaccgatcatccag
agcatggcgcagctggacgcgacctatggcaaggatgtctcgcgcacgatcatcaccaac
catgccttgcaaatcgtctacgccccacgggagcagcacgacgccaacgactactcggac
atgctcggctacaccacggtgcgcaagaagaacaagtcgcacaccagtggcaagcaaagc
agcgtgtcctactccgagaccgagcaacgccgcgcattgatgctgccgcaggagttgaag
gcgatgggctttgacaaggaggtcttcctctatgaaggcatcccaagcccggtgctctgc
gagaagatcaagtattacgaagacgcgtatttcaccaagcggctgttgccaaaggtgagc
gtccagaccctgaagatttag

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