KEGG   Xylella fastidiosa M23: XfasM23_0035
Entry
XfasM23_0035      CDS       T00692                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
xfn  Xylella fastidiosa M23
Pathway
xfn03420  Nucleotide excision repair
xfn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:xfn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    XfasM23_0035
   03430 Mismatch repair
    XfasM23_0035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xfn03400]
    XfasM23_0035
Enzymes [BR:xfn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     XfasM23_0035
DNA repair and recombination proteins [BR:xfn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XfasM23_0035
   MMR (mismatch excision repair)
    Other MMR factors
     XfasM23_0035
SSDB
Motif
Pfam: UvrD_C UvrD-helicase AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_30 Viral_helicase1 DUF4391 DUF3553
Other DBs
NCBI-ProteinID: ACB91493
UniProt: B2I666
Position
complement(46520..48691)
AA seq 723 aa
MLDHLNQNQREAVAAAPGHYLILAGAGSGKTRVLTHRIVWLNEVNGVPTHSMMAVTFTNK
AAGEIQQRIDLQLRHGKRGMWIGTFHSLAHRLLRLHWNDATLPENFQVIDSDDQLRLVKR
VIQSLGLNDTLFPPKQAMWWINTQKDEGRRPEHIQPESHDDWIETQRRIYTEYQERCNRA
GLVDFSELLLRAHELLRDTPALLTHYRSRFREILIDEFQDTNAIQYAFVRVLANDTGHIF
AVGDDDQAIYGWRGAKVEHVQHFLKDFPNVQTIRLEQNYRSSANILDAANAIIAHNPDRI
GKRLWTESGVGESIDLYAAYNEIDEARYIVERARQWVRDGGSYGEIAVLYRSNAQSRAFE
EVLQSEHIPYRVYGGMRFFERAEIKDALAYLRLLANRSDDAAFERVVNTPVRGIGERTLD
EVRHLARTQGLALWDAAMACTQSTTLTARARNALASFLNLLQQLAVETNQMGLAERIDHM
LQRSELRQHWKKEARGSLDAESRQENLDELVSVASRFVLPQNDEDTPIMTELDAFLSYAC
LESGDGQVQAGEEGVQLMTLHSAKGLEFPLVFLVGLENGLFPSARSLDEHGRLEEERRLA
YVGITRARHKLILSYAQARRIHGKDNYNVPSRFLREIPQDLLHEVRPTIQVSHQPPLGAT
QRPAHDERDAAPIKLGVNVIHPTFGCGVVVDYEGSGVHTRVQIKFDDAGTKWLVMAYAKL
SVV
NT seq 2172 nt   +upstreamnt  +downstreamnt
gtgcttgatcacttaaatcagaaccagcgcgaggccgttgctgcagctcccggccactac
ctgatcctcgccggtgccggatcaggaaaaacccgcgttctcactcatcgcatcgtttgg
ctcaacgaggtaaatggggtacccacccacagcatgatggccgtcaccttcacgaacaag
gccgccggcgaaatacaacaacggattgatctacaactgcgccacggcaaacgcggcatg
tggatcgggaccttccatagcctggcgcatcgcttactgcgcctgcattggaacgacgca
acattacccgaaaacttccaggtcatagacagcgacgatcaattgcgcctcgtcaaacga
gtgatccagtccttgggattgaatgacaccctcttccctcccaaacaggcgatgtggtgg
attaatacacagaaagatgaaggacgccgcccagagcacatccaacccgagtcacacgac
gactggatcgagacgcaacgccgcatctataccgagtatcaggagcgctgcaaccgcgct
ggtttggtcgatttttcggaactgctgctgcgggcacatgaactactacgcgatacacct
gcactactgacacactaccgttcgcgcttccgtgagattctgatcgacgaattccaagat
accaacgccatccagtacgcgtttgtgcgtgtcctcgccaatgacactggccacatcttc
gccgtcggcgatgacgaccaagccatctacggctggcgtggtgccaaagttgagcatgta
caacacttcctgaaagattttccaaacgtgcagaccatccgcttggagcaaaattaccgc
tccagcgccaatatccttgacgctgccaacgcaatcattgcccataacccagaccgaatt
ggcaaacgcctctggactgaatccggtgttggtgaatccatcgacctatacgccgcctac
aacgagattgatgaagcccgctacatcgtcgaacgcgcccgccagtgggtacgcgacggc
ggcagctacggcgagatcgcagtgctttaccgtagtaacgcacagtcccgcgcgtttgaa
gaagtgctgcaatccgaacatatcccctaccgtgtttacggcggcatgcgcttcttcgag
cgtgccgaaatcaaggatgccctagcctatctgcgcctgcttgccaatcgtagcgatgat
gctgcgttcgaacgcgttgtaaatacccccgtacgcggcatcggtgagcgcaccttagat
gaagtaagacacctagcacgtacccaaggcttagcactatgggatgcggcaatggcatgt
acccaatcaaccacgctgaccgcgcgcgcgcgtaacgccttggcgagtttcctcaattta
ctgcaacaacttgcggtggaaaccaaccagatgggtttagccgaacgaattgaccatatg
ctgcagcgttcggagttacgccagcactggaagaaagaagcgcgtggttctctggatgcc
gaatcacgtcaagaaaacttagacgaacttgtttccgtcgcttcacgctttgtccttccg
caaaacgacgaagacacacccatcatgaccgaattagacgcgttcctatcctacgcgtgc
ctggaaagtggtgatggtcaagtccaagctggtgaagaaggcgtacaactgatgacccta
cactcagccaaaggcttggaattccccctagtcttcttggtgggcttggaaaatggatta
ttccccagcgcgcgttccctggatgaacacggccgactagaggaagaacgccgcttagcg
tatgtcggcatcacccgcgcccgtcacaaactcatcctcagctatgcccaagcacggcgt
atccacggtaaagataactacaacgtcccctcacgctttttacgcgagatcccgcaggat
ctattgcatgaagtacgccccaccatccaggtctcacaccagcccccattaggagcaacg
caacgtccagcccatgatgaacgcgacgcagcacctatcaagctcggcgtgaacgtcata
caccctacatttgggtgcggcgtggttgtcgactacgaaggcagcggcgtgcacacccgc
gtacaaatcaaattcgatgacgccggtacaaaatggttggtcatggcatacgccaaactc
agcgtggtatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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