KEGG   Xanthomonas fragariae: BER92_08295
Entry
BER92_08295       CDS       T04667                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
xfr  Xanthomonas fragariae
Pathway
xfr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:xfr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BER92_08295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xfr03400]
    BER92_08295
Enzymes [BR:xfr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BER92_08295
DNA repair and recombination proteins [BR:xfr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BER92_08295
 Prokaryotic type
     BER92_08295
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH DUF6127
Other DBs
NCBI-ProteinID: AOD14736
UniProt: A0A1Y6H0U6
Position
complement(1830597..1831307)
AA seq 236 aa
MNATTSTPPARRGSSMRKPEIQEMFARLRELNPHPTTELEYTTPFELLIAVLLSAQATDV
GVNKATRKLYPVANTPRDILDLGEEGLKRYIATIGLFNAKAKNVIATCRILLEQYGGEVP
HDRTALEALPGVGRKTANVVLNTAFGEPTMAVDTHIFRVSNRTGLAPGKDVRAVEDKLVK
VIPAEFLHDAHHWLILHGRYVCKARKPDCPGCVIHDLCRYRDKTVSPFERPTTQRG
NT seq 711 nt   +upstreamnt  +downstreamnt
atgaacgcgacaacgtcgaccccgccggcacgtcgcggcagcagcatgcgaaaaccggaa
atacaggaaatgttcgcgcgcctgcgcgaactcaatccacacccgaccaccgaactggaa
tacaccacgccgttcgagttattgatcgccgttctgctctcggcgcaggccacggatgtc
ggcgtcaataaagccacccgcaagctgtatcccgtggccaatacgccgcgcgacattctc
gatctcggcgaagaaggcctgaagcgctacatcgccaccatcggtttattcaacgccaag
gccaaaaacgtcatcgccacttgccgcattctgctggagcaatacggtggcgaagtgccg
cacgaccgcactgcgctggaagcgttgcctggcgtgggccgcaagaccgcaaacgtggtg
ctcaatactgcgttcggcgaacccaccatggcagtggacacgcatatctttcgcgtctcc
aatcgtaccggccttgcaccgggcaaagacgtgcgcgcggtcgaagacaaactggtgaag
gtcattcccgccgagtttttgcacgacgcacaccactggctgattctgcacggccgctac
gtatgcaaggcacgcaaaccggattgcccgggctgcgtgatccacgatctatgccgctat
cgcgacaagaccgtttcgcccttcgaacggccgacaactcaacgtggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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