KEGG   Xenopus laevis (African clawed frog): 100286772
Entry
100286772         CDS       T01010                                 
Symbol
fancm.L, fancm, kia1596
Name
(RefSeq) FA complementation group M L homeolog
  KO
K10896  fanconi anemia group M protein
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    100286772 (fancm.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xla03400]
    100286772 (fancm.L)
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     100286772 (fancm.L)
SSDB
Motif
Pfam: FANCM-MHF_bd DEAD Helicase_C ResIII ERCC4
Other DBs
NCBI-GeneID: 100286772
NCBI-ProteinID: NP_001171151
Xenbase: XB-GENE-6259111
UniProt: D5MDW0
Position
8L:83570714..83651587
AA seq 2166 aa
MSGKQKTLFQTWGTNQPPEPRKTKEIKPRKGKTNGVGRGKQSVSRGVLHRPLVPVRQQPP
TTCQEEEDDDDVMVVAVYEAEKTFNQTLQAEGLQRNDRHNAHSVQGKLWDELGKTSSPVV
VDLPGTSCQLQGDQRGNTSNECRTLGSSKYLPTTHEHQDMESECQPKATSIDNLPGFDLA
AGSLWIYPTNYPLRDYQFNISYTALLQNTLVCLPTGLGKTFIAAVVMYNFYRWYPSGKIV
FMAPTKPLVAQQIEACFRVMGIPQGHMAEMTGSTQAQNRKNIWETHRVFFLTPQVMVNDL
TRGACPALEIKCLVIDEAHKALGNHAYCQVVRELTNYTNQFRILALSATPGGDTKSVQQV
VSNLLISQIELRSEDSSDIQPYSHARQLEKFVVPLGEELESVQKTYLQLLDTFAGRLIQN
NVLSRRDIPNLTKYQIILSRDQFRKNPPANIIGAQQGVIEGDYALCISLYHGYELLLQMG
TRSLYSYLHGIIDGSKGMTRARNELSRNGDFMELYKQLEKMFSDTKVAEGNGSLLFNSSL
RADAKKPFLYSHPKLKKLEEVVVQHFKSWKNGDQNSSNQTPEGTRIMIFSSFRDSVQEIA
EMLNHHHPTVRVMTFVGHSSAGKGVKGFTQKEQLEVVKRFREGGFNTLVSTCVGEEGLDI
GEVDLIICFDAQKSPIRLVQRMGRTGRKRQGRIVVILCQGREERTYNQSQSNKRSIYKAI
LGNNKMLHLHPQSPRMVPEGLNPKVHKMFITQGNYEAKESIRPMNEDRRSSTKHRKSSLL
SNASDTIKEEWELTHAEFDTWNRMYRLQESDGIMDVRLPKSQFEYFIDAEPSTERPSGNI
RELSLTEWRVWQNQPFPTHSVDHSDRCKNFIDVMEMIELMRMEEGGCNYDLEMMSYLNKE
DVDATITRANLNVSGNNTKVADKLTHRKRGKSCKTTTLPLVLEPDEDFMSSFKKNTKSRS
TDFASEDSKIHVQGTEEGGSTELEHVFCLGEDMPDKECLFNDICTKSNDSASNAVTNNQS
GSDHVLLSDSENAVAKSQINAAAKADSGYHSCNEEPSSILSNLFYTPQTFINHGVFAEFV
DHKMCELKKMLSDIKIFLLHSPPPINELDCLDDYKEDSDFSHHSCRSGPVKEEDLLLRPL
TPIPVTINSREMQADSNYKKQLDHVADKLFREREKDDVLFRESLSQHIDAIKNKEHIDAL
KVVGEAAHSPDHNVRFDYEDSSEPSTSKDLQDGRKENDDQWDEMFDYESQDKENENFASQ
VNMGDTEGSCAKNENHNINSVPSFLEDSFDLFEEDGFSDNADYGQFDLNHESKDKPPDDA
NTTVSFNMFDPSLLLQDQVQTEREPETNNDIRSENLEEELDCSEELFSVNFDLGFSIEDD
ELSESDSIIETPSKDFKVPNPLKRNDMTAIGCNAISTPVMSGKIHTTFSAVAEKQIQFFS
PLEPVKGKFSLTPEKSLCSSSFLTPLEEKFKSPHMSSDNKHDCDLGRPQTSKAREQSIYS
ATNVSVHDGSAVQEDRRQTPPSSEHSCIESSLESEDNIVFCRKRKLTKANVLMSPQTASS
DCDFDSPIPNAKKRRHVLNTPGSSEEEEEKDFKSRHSTVQEKSAALSRKSYQDRAVALSK
KRKRSKQTARHFLDEEAELSSEGAEFVSSDENVHSDNEQDTSLAEFLNDDTQLSQVLNDS
EMQGVYLKSVRSPAFGGRFKMAPRKRKHNMSIFSQIPEQDESYMEDSFCVQEEEDDDDKA
NDLESSEEEVEINFDLLKDDSIIGGKKQYCTRRRLKLKEAQSRHPSDTQPAKKKTRLIIQ
DDSSEEETGATSKLKDTSHPQKTFPSSKPSLGNTSSRNQGAPTLIRNEYDLPLRDRCQAR
INIKASLSEELDFQAASKSSSSTKSRTSSGIIHSERKGEVSTGVVNFDLTLDSSSVTNLS
FPRTDEVSAPTPIRTTPCILADTREISSGPEVISYLRTALGVKVEVCSLAGCDYIVSNRL
AVERKSQSEFANAANRNKLVDRIQHLQHLFDRVCVVIEKDRVKPGETSRIFQRTRYYDST
LSALISAGVQVLFSSSQAETASLLKELALLEQRKNTAIDVPTEVKGHKQEAMQFYLSIPN
VSYITALNLCHRFDSVAQMANSSVQVISDRAHMSAQKAEELYRYVHYMFEEEMVPPENPT
KRSRVS
NT seq 6501 nt   +upstreamnt  +downstreamnt
atgagtgggaaacagaaaacactttttcagacgtggggaacgaaccaacccccggaaccc
aggaagaccaaggaaattaagcctagaaaaggaaaaaccaatggagttggtcgtgggaaa
cagtcagtgtctcgaggggttctacacaggccgcttgtaccagttaggcaacaaccacct
acgacctgtcaagaggaggaggatgatgatgatgtaatggtggttgctgtatatgaggca
gagaaaacatttaaccaaacccttcaggcagaaggtctccagcggaatgacaggcataat
gcccactcagtgcaaggcaagctatgggatgaactgggaaaaacatcttcccctgttgtt
gttgacttacctggaacttcatgccaattacagggagaccaaaggggcaacaccagcaat
gaatgtagaactcttggaagctctaaatatttgcctaccactcatgagcatcaggacatg
gaaagtgaatgtcaaccaaaagccactagtattgataacctgcctggttttgatctggca
gctggtagtttgtggatctatccaactaattatccactacgagactatcagtttaatata
tcttacacggctttgctgcaaaacaccctcgtgtgtctgcccactgggctgggtaaaacc
ttcatagctgctgtggtgatgtacaacttctaccgttggtatccttctggcaagattgtc
ttcatggctcctaccaagcctctggtggcccagcagattgaagcctgctttagagttatg
gggattccacagggccatatggcagaaatgacaggaagcacccaggcccagaatcgtaaa
aacatttgggaaacgcacagagtcttttttcttacaccccaggttatggtgaatgatctt
acacgtggtgcttgtcctgctttggaaatcaaatgtctggttattgatgaggcacataaa
gctcttggtaaccatgcttattgtcaagttgtaagagaattgaccaactatacaaaccag
ttccgtattcttgctctgagtgccacaccagggggtgatactaagtcagtgcaacaggtg
gtgtccaacttgttgatttcacaaatagaactgaggtcagaggattcttctgatatccag
ccctacagtcatgcaaggcagcttgagaagtttgttgtgccacttggtgaggaacttgag
tctgtgcagaaaacctacctacagttgctggatacatttgctggacgtcttattcaaaac
aacgttctatccagaagagatattccaaatctaacaaaatatcagatcattctgtctcga
gatcagttcaggaagaatcctccagcaaacataattggagctcagcagggggtgatagaa
ggagattatgctctctgtataagtttataccatggttatgaactgctcttacaaatggga
actcgctctttatactcttatcttcatggaataatcgatggctccaaaggcatgacccgt
gcacggaatgagcttagccgcaatggagacttcatggaactatataagcagctggagaag
atgttttctgacactaaggttgcagaaggaaatggaagtcttcttttcaactcaagtcta
agagcagatgccaaaaagccatttttgtatagccacccaaagttaaaaaaactagaagaa
gttgttgtgcagcattttaaatcttggaaaaatggagatcaaaactcttctaaccagact
cctgaaggcactcggattatgattttctcatcatttcgagacagtgttcaagagattgca
gaaatgcttaatcatcaccaccctactgtaagggtgatgacattcgtaggccattcatct
gctggtaaaggagtcaagggtttcacacagaaggagcagcttgaggtagttaaacgattt
cgtgagggtggttttaacactttggtctccacgtgtgtaggggaagaaggacttgatata
ggagaagtggatcttatcatatgttttgatgcccagaagagtccaattcgtctagttcaa
agaatgggccgcactgggaggaaacgtcaaggccggatagttgtgatactttgccaggga
cgggaggagaggacttataaccagagccaaagcaataaacggagcatctacaaagccatt
ttaggcaataacaaaatgttacatctccatcctcaaagccctcgaatggttccagagggt
ttgaaccccaaagtgcataagatgttcatcacacaagggaattatgaagccaaagagagc
attcggccaatgaacgaagacaggcgctcaagtacaaagcatcgtaaatcctcattgttg
tctaatgcatctgataccataaaagaagagtgggaactgacccatgctgaatttgatacc
tggaacagaatgtaccggctgcaagagtctgatggaataatggatgtgagattgcctaaa
tctcaatttgagtactttatagatgcagaaccaagcacggaacgcccatctggaaatata
cgtgagctctctttaactgaatggagagtctggcaaaaccaacccttccctacccactca
gttgatcactcagacagatgcaaaaacttcatagacgtaatggagatgattgagctgatg
agaatggaggagggtggttgcaactacgatttggaaatgatgtcttacttgaacaaagaa
gatgttgatgcaacaatcacaagagctaatctcaatgtttcaggcaataacactaaagtc
gctgataagttaactcatcgcaaaagagggaaaagctgtaaaactacaactttaccttta
gttcttgagcctgatgaggattttatgtcttcatttaagaagaacacaaaatcacgttcc
acagactttgcatcagaagattctaagatccatgttcaaggaacagaggaaggtggcagt
acagagttagaacatgtgttttgcttaggtgaagatatgcctgataaagaatgtttattc
aatgatatttgcactaaaagcaatgattccgcgtctaatgctgtaaccaataatcaatca
ggttctgaccatgtgttactaagtgattctgaaaatgcagtagcaaaatcccagattaat
gcagctgccaaagcggattccggctaccatagttgtaatgaagagccttcttctatttta
tcaaacttgttttacaccccacagacatttattaatcatggtgtgtttgcagaattcgta
gaccataagatgtgtgagctaaagaaaatgttatcagatataaaaatatttttgttacat
tccccacccccaataaatgaacttgattgtttggacgattataaggaagattctgatttt
tcccatcattcttgccgatctggtcctgtaaaagaagaagacctcttgctacggccacta
acacctatacctgtaacaatcaattcaagggaaatgcaggctgacagtaattacaagaaa
cagcttgaccacgtagctgacaaactatttcgagagcgggaaaaagatgacgtgcttttt
agggagagtctttcacaacacattgatgctataaagaacaaagagcacattgatgctcta
aaagtagttggtgaagcagcacattcaccagatcataatgtaagatttgactatgaagat
tcttcagaacccagtacctccaaagatttacaagatggtaggaaagaaaatgacgatcag
tgggatgaaatgtttgattatgaaagccaagataaagaaaatgaaaatttcgcttctcaa
gttaacatgggtgacactgaaggttcatgtgcaaagaatgagaaccataacatcaattct
gtgccttctttcttggaggacagctttgatttgtttgaagaggatggattttctgataat
gccgactatgggcagtttgatttgaaccatgaaagcaaagataagccacctgatgatgct
aacacaactgtaagcttcaacatgttcgatccatctctgttgcttcaagaccaagtacaa
actgagagagaaccagaaacaaacaatgatattagatcagagaatttagaagaagaactt
gattgctctgaggaactcttttctgtaaattttgatctagggttttctattgaagatgat
gaactttcagaaagtgatagtatcattgagaccccttctaaggatttcaaagtcccaaac
cccctcaaaaggaatgacatgactgccattggatgtaatgctatttcaacacctgtgatg
tctggtaaaattcacactacattttcagcagtagctgaaaagcaaattcagttcttttca
ccactggaaccagttaaaggaaaattctcattaacgcctgaaaagtcattgtgctcctca
tcatttttgacaccacttgaggaaaagttcaaaagtccccacatgtcttcagataataag
catgactgtgacttgggtagaccacaaacctccaaagcaagagaacagagcatatattct
gcaaccaatgtcagtgttcatgatggcagtgctgtccaagaagatagaagacagacacct
ccaagttcagagcactcatgtatagagagcagcctggaaagtgaagacaacattgttttc
tgtcggaaaagaaaattgacaaaggccaacgtccttatgtcgccacagactgcaagcagc
gactgtgattttgactcaccaattcccaatgccaagaagcgcagacacgtgttaaacaca
cctggctcaagtgaggaggaagaagagaaggatttcaagtcaagacattccaccgttcag
gagaaatctgctgccctttctagaaaatcatatcaggacagagcagtagcgctatcaaaa
aagagaaagcgatcaaagcaaacagcaaggcactttctagacgaagaagccgaactttcc
tccgaaggagcagagtttgtttcctccgatgagaatgttcattccgataatgaacaggac
acgtcgcttgctgagtttttaaatgatgacactcagctttcacaggtcctgaatgactca
gagatgcagggagtatacctgaagtccgtgcgtagccccgcttttggtggtcgttttaaa
atggcacccaggaagaggaaacataacatgtctattttttcacagataccagagcaagat
gagagctacatggaagacagcttctgtgttcaagaagaagaagatgatgatgataaggca
aatgacttggaatctagcgaggaagaagtggaaattaactttgacctcctaaaagatgac
agcataattggtggtaaaaaacagtactgtacaaggaggagattgaagctcaaggaagca
caatcaagacatcctagtgatacacaacctgccaaaaagaaaacaaggcttattattcag
gatgactctagtgaagaagagacaggagcaacatctaaactgaaggatacttctcatcct
caaaagacttttccttcctctaaaccatctttgggtaacacttcttctaggaaccaaggt
gctcccacgcttattaggaatgaatatgatctacctctgcgggaccgatgccaagcaagg
attaatatcaaggcctcgctttctgaggaactagattttcaggcagcaagtaaaagtagt
agtagcactaaatcaagaacatcaagcgggattatccactctgagagaaagggagaagtc
agtactggagtggttaactttgacttgaccctggatagttcatctgtaacaaatctctcc
tttccaaggactgatgaagtatctgctcctacaccaatcaggacaactccatgcattctt
gctgacacccgggaaatctcctctgggcccgaggtcatctcctacctaaggacagctctt
ggggtgaaagtggaggtgtgctctcttgctggatgtgattatattgtcagcaatcgctta
gcagtggagcgcaagtcacagtctgaatttgcaaacgctgccaacaggaacaaactggtg
gatcggatccagcacttgcaacatttgttcgatagggtttgtgttgttatagagaaggac
cgagtcaaaccaggtgaaacgtcaaggatatttcagagaacaagatattacgacagcaca
ttgtctgcattaatcagtgctggtgtccaggttctgttcagttccagccaggcggagaca
gcgagtttactaaaggagctggcattattagagcagagaaagaacactgccattgatgtg
ccaacggaggtgaaagggcacaaacaggaggcaatgcagttctatctgtcaataccaaac
gtcagctacatcaccgcactcaacttgtgtcaccgctttgactcagtcgcacagatggcc
aacagctctgtgcaagtcatctctgaccgggcccacatgagtgctcagaaagcagaggaa
ctctatcgctatgtacattacatgtttgaagaggagatggtgccgccggagaaccccact
aagcgaagcagagtctcttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (65)   
   KEGG ORTHOLOGY (1)   
   RefGene (60)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (81)   

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