KEGG   Xenopus laevis (African clawed frog): 108696525
Entry
108696525         CDS       T01010                                 
Name
(RefSeq) agrin isoform X1
  KO
K06254  agrin
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04512  ECM-receptor interaction
xla04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108696525
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108696525
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:xla00535]
    108696525
Proteoglycans [BR:xla00535]
 Extracellular matrix (ECM) proteoglycans
  Basement membrane proteoglycans
   108696525
SSDB
Motif
Pfam: Laminin_G_1 Kazal_2 Laminin_G_2 Kazal_1 NtA Laminin_EGF EGF CFAI_KAZAL Laminin_G_3 SEA hEGF
Other DBs
NCBI-GeneID: 108696525
NCBI-ProteinID: XP_041425257
UniProt: A0A8J1L6S5
Position
7L:complement(90470129..90761908)
AA seq 2104 aa
MGRLRGAPAALLWTLCALMAVDLGFSRGPCPERELEQREEEANVVLTGTVEEIMNVDPVH
HTYSCKVRVWRYLKGREIVTNDILLDGGNKVMVGGFGDPTICDNQVSTGDTRIFFVNPAP
RSMWPSHRNELMLNSSLMRITLRNLEEVEMCVEEHRRLSADKPGHVTNAQPTLQDVCRGM
LCGFGAVCEKSSADPSQATCICKKTACASIVAPVCGSDYSTYSNECELERAQCNQQRRIK
VISKGPCGTKDPCSTVSCSYGSTCVRSTDGQTAKCICPASCTGVPENVVCGSDGKDYHNE
CLLNKQACDNQENLYKKFDGPCDPCRITMNNLNKACRVNPRSRQLEMQYRPEYCPVRRDP
VCADDGVTYDNDCVMTRSGFIRGIDLQKVHSGQCQPQDKCKEDCKHNSVCLNRRGVTRCS
CDRVTCDGTYKPVCGGDSRTYANDCERQKAECFQKASIPVKHKGPCDLHSPSPCLNTTCS
FGAACVVKNKKAVCECQQVCQAVYDPVCGSDKRTYGNPCELQSTACTLKKEITILHKGPC
DRCGKCQFGAICEAETGRCVCPTECVPSAQPVCGTDGNTYESECELHVRACTQQINLQVA
AQGDCKTCGNTLCIFGAKCVNSQCVCPTCERQPYLPVCGSNGVSYANQCELKAASCKQMK
RIEVSRAGSCEDECGSGTDGSGSGEDSECEQDRCRRYGGSWDEDAEDDRCVCDFTCHAVL
RNLVCGSDGITYSNECELKKTRCERRQDLYVAGQGPCRAATTSSPPLVPHCSHTVYGCCP
DNATAALGVGLAGCPSSCQCHQYGSYGGTCDPTTGQCSCKPGVGGLKCDRCEPGFWNFRG
IVTDKKSGCTPCNCDPVGAVRDDCEQMTGLCSCKTGISGLKCSQCPDGRKPGLTGCEKDP
SAPKSCNAIKCQFGATCVIVGGFAHCECPSPLCAEANLTKVCGSDGVTYGDWCQLKTIAC
RQGRTITVKHTGPCQETVTHANLQTLSPTGTPSPPIVRTLPTPGTAKTSKSKKKTDSFQL
VFEATSLSPFSSSTMRTVTQTHKAHTSTVRPAVTIPTVHPTVSQIYDESGSGSGDEELEA
SGDRDLSGVEPEEPFDAENEQQEEAEEKRDFVTTTVIERASCYNTPLGCCSDGKTPANDA
EGTNCPKTKIFQGVLIVEELEGQEVFYTPEMSDYKSELFGETARSIENALDNLLRNSDVK
RDFKSIRVRDLGPSNSIRTIVEAHFDPATTMSAMDVQRALLRQLKSSKKKAITIKNPIQD
NVKFLDFGEIPDWVPLMVTTTTTTVATTSMVATTGIATTTSPVVSTTTTVATTPPPRRIV
AVKTTPVPVVQHTTLRMTTRRPVTTKRPMTTIPATTRRKPPRIPTKKPPRPCESHPCLHG
GTCEDNGKDFTCSCPAGRGGAVCEKTIKYFIPGFGGKSYLAFKMMKAYHTVRIAMEFRSS
EQNGLLLYNGQSLGKDFISLAVINGFVELRFNTGSGTGIITSKVPIEPGKWHQLVVTRNR
RSGMLSVDGESHVNGESPSGTDGLNLDTDLFIGGAPEDQMAVVSERTSVSVGLKGCIRQL
DVNNQLYNLQEGGADVLYGSRVGECGNNPCQPNPCHNGAVCQVKEAEMFHCQCPNGYTGP
TCADERNPCDPNPCHVSATCLVLPEGGAKCECPMGREGEFCEKVTNQDLNLPFLPQFNGY
SYLELKGLQTFATDLQDKLAMEVVFLANSPNGLIFYNGQKTDGKGDFVSLSLHDGNLEYR
YDLGKGAAVIKSKEKIPLNKWVSVSVERSGRKGLMRINNMEQVTGESPKSRKAPHTALNL
KEPLYVGGTPDFSKLARAAAASSSFQGAIQKITIKGLPVLREENIRSAIEISTFRGHPCT
QKPFPCQNSGLCSPIKGDYECVCQRGFSGSHCEKVTIEKAAGESEAVSFDGKTYLEYHIA
AAKSQLTNEIPETGLVDNPDDPSEKVLLVNQFDLSIKTEATQGLILWSGKGTERAHYIAL
AVVDGYVQMTYDLGSKPVVLRSTVRVNTNKWTHIKAVRDNRDGILHVGNEAPVHGSSPLG
VKELETDGALWLGGIEKLSMSYKLPKAYSTGFIGCMKDVLVDQQELHLEEDALNKPPILY
CSAK
NT seq 6315 nt   +upstreamnt  +downstreamnt
atgggaagactgcggggagctccggccgcgcttctttggactttatgcgctctgatggcg
gtagatttggggttcagcaggggcccgtgtcccgagagggagctggagcagagagaagag
gaggcgaacgttgtgctcaccgggacggtggaggagatcatgaacgtggacccggtgcat
cacacctactcctgcaaggttagagtatggcggtatctgaagggtcgagagattgtgaca
aatgatattctgctggatggaggaaacaaagtgatggttggaggatttggagaccccaca
atctgtgacaatcaggtgtctacaggcgacacaaggattttctttgttaatcccgccccc
cgatctatgtggcccagtcatcgcaatgagctaatgcttaactccagcctaatgaggata
acccttaggaacctggaagaggtagaaatgtgtgttgaagagcacaggaggcttagcgcc
gataagcctggtcatgtcactaatgctcagccaactctacaggatgtttgccgaggaatg
ctctgtggatttggtgcagtatgtgagaagagcagcgctgacccatctcaagcaacgtgc
atctgcaagaaaaccgcctgcgcctccattgttgcccctgtgtgcggttccgactattct
acttacagcaacgagtgtgaactggagagagcccagtgcaaccaacagaggagaatcaaa
gtcatcagcaaggggccatgcggtaccaaggacccatgctcaacagtgtcttgtagctat
ggcagtacctgtgtccgctcaacagatggccagacggcaaagtgtatctgccctgccagc
tgcacaggggttccagaaaatgtggtttgcggcagtgatggcaaagattaccacaatgag
tgtctccttaacaagcaggcatgcgacaatcaggagaatctctacaagaagtttgatggt
ccttgtgatccatgcagaatcaccatgaataatctaaacaaagcatgcagagtaaaccca
cgcagtcggcaactggagatgcaatacaggccagagtactgcccagtccgcagagatccc
gtttgtgcagatgacggtgtgacttacgacaatgattgtgtaatgacccgatctggattc
atccgtggcattgatctgcagaaggtgcactcagggcagtgccagcctcaagacaaatgc
aaggaagattgtaagcacaattctgtgtgccttaaccgcagaggtgtgacccgttgttct
tgcgaccgtgttacttgcgatggcacttacaaaccagtctgcggtggggacagtcgcacg
tacgccaatgactgcgagagacaaaaggcagagtgctttcagaaagcttccatcccagtc
aaacacaaaggcccatgcgatctccattctcccagcccgtgcctgaacacaacatgcagt
tttggagcagcatgtgtagtgaaaaacaagaaggcagtatgcgaatgccaacaggtgtgc
caggcagtgtatgacccagtgtgcggcagtgataagcgcacttatggcaacccatgtgag
ctgcagtcaacagcctgcacacttaaaaaagaaataaccattttacacaaggggccttgc
gatcgctgtgggaaatgccagtttggtgccatctgtgaagcagagactggccgttgtgta
tgtccaacagaatgtgtgccttcggcgcagcctgtgtgtggtactgatggaaatacatat
gagagcgagtgtgagctccatgtacgagcatgcactcagcagattaatctacaagtagca
gcccaaggagactgcaaaacctgtggcaataccctttgtatctttggtgccaaatgtgtg
aacagccagtgcgtgtgcccaacttgtgaacggcaaccttaccttccagtgtgtggcagc
aatggtgtctcctatgctaaccaatgtgaactgaaagctgcatcctgtaagcagatgaag
cggattgaagtatctcgagcaggatcttgtgaagatgaatgtggctctggtactgatggt
tctggttcaggggaggatagcgagtgtgagcaagatcgatgcaggcgctatggtggttca
tgggatgaagatgcagaggacgatcgttgcgtctgcgactttacctgtcatgctgtgctg
cgaaacctggtttgtggatcggatggcattacatactctaatgagtgtgagctaaagaaa
acccgctgtgagagacgtcaggacctgtatgtggctgggcagggtccctgtcgagctgcc
accaccagctctcctcctttggtgccacactgtagtcatactgtgtatggctgctgtcct
gacaatgctacagctgcccttggcgttggcctggccggatgcccaagcagctgtcagtgc
caccaatatggctcctatggaggaacctgtgatcccaccactggtcagtgttcttgtaaa
cctggtgtaggaggactgaagtgtgaccgatgtgagcccgggttctggaacttccgcggc
attgttacggataagaagagtggctgcactccttgtaactgtgacccagtcggtgccgtt
cgtgatgactgtgagcagatgacaggactttgttcatgcaaaacaggaatctccggctta
aagtgcagccagtgccctgatggacgcaagcctggccttacaggctgtgagaaagatcct
tcagctcctaaatcttgcaatgccatcaaatgccagtttggggcaacttgtgtgatagtt
ggaggatttgctcactgcgaatgcccatctccgctgtgcgctgaggctaatctcacaaag
gtctgtggttctgatggtgtgacatacggagactggtgccagttgaaaaccattgcttgc
cgtcagggccggactatcacagtaaaacacactggaccgtgccaagagactgttactcat
gccaaccttcagacattgagtccaacaggaacaccctctccacctatagttcggactctg
ccaaccccaggaaccgcaaagacctcaaagtccaagaaaaagacagattccttccagtta
gtctttgaggccacatcactcagtccattttccagcagcacaatgagaacagtgactcag
acgcataaagctcacacttctaccgttaggccagccgtcaccattcccacagtccacccc
actgtgtctcagatttatgatgaatcaggaagtggcagtggggatgaggagctagaagct
agcggtgatcgggatttaagtggtgttgaacccgaagagccatttgatgcagagaatgaa
caacaggaagaagctgaagagaagagagattttgtaaccaccacagtcatagaaagagcc
agctgctataacacacctctaggatgctgctctgatggaaagaccccagctaatgatgca
gaaggaacaaattgcccaaaaaccaaaattttccaaggtgtcctcattgttgaagagttg
gagggacaagaggtgttctacacaccagagatgtcagattacaagtctgagctgtttgga
gaaactgccagaagcattgagaatgcactggataatctacttcgaaattcagacgtcaag
agggatttcaagagcatccgtgtgagggaccttggaccaagcaattccatcaggaccatt
gtggaagcacattttgatccagctaccaccatgtctgccatggatgtgcagagagcattg
ctgcgtcagctcaagagctccaagaagaaagcaataaccataaagaatcccattcaggat
aatgtcaagtttctggactttggtgagatccctgactgggtgcctcttatggttacaacc
acaactacgacggtagcaaccactagtatggtagctacgactggaattgccaccaccaca
tcacctgtggtcagtaccaccacaaccgtggcaacaactccaccacccagaagaatagtt
gcagtcaagaccaccccagtgccagttgttcaacacaccactctgagaatgacaacaaga
cgaccggtgactacaaaaagaccaatgaccactattcctgccaccaccaggagaaagcca
ccacgtattcctaccaaaaagcccccacgaccatgcgaatcacacccttgtttacatgga
ggtacttgtgaggataatgggaaagatttcacttgtagctgcccagctggcagaggagga
gctgtgtgcgagaaaactattaagtattttattcctgggtttgggggtaagtcatacctg
gcattcaaaatgatgaaggcatatcatacagtgcgcattgccatggagttcagatcctct
gagcagaatgggcttctcctatacaatggtcagtcacttggaaaggacttcatctcgctt
gcagttattaacggctttgtagaactcaggtttaatactggatctggaactggaataata
accagtaaagtgcccattgaacctggcaagtggcatcaattagtagtgacccgtaacagg
cgaagtggcatgttatctgtggatggtgaatcccatgtcaatggtgaaagcccgtctgga
accgatggcctcaacctagacacagacctgtttataggaggagctcctgaggaccagatg
gctgtggtatcagaaaggacctctgtctctgttggtctcaaaggctgcatccgtcaacta
gatgtgaacaaccaattatacaacctgcaagagggtggagctgatgtcttgtatggaagt
agggtgggagagtgtggaaacaacccatgccaacccaacccatgccataatggtgctgta
tgtcaagtaaaggaggctgaaatgttccactgccagtgtcccaatggttatacagggcca
acctgtgcagatgagcgcaacccatgtgaccccaacccctgccatgtttctgctacctgt
ctggttctacccgagggtggtgccaaatgtgaatgcccaatgggcagagagggagagttc
tgtgagaaagtgaccaaccaggatctgaatttgcctttcttacctcaattcaacggatac
tcttacttggaactgaagggactgcagacatttgccactgacctacaggacaagcttgcc
atggaagtagtgttcttagccaacagccccaatggcctcatcttctataatgggcagaaa
acggatggaaagggagattttgtgtcattgtcccttcacgatggaaatctcgaataccgt
tacgatctcggaaagggagctgctgtgatcaagagcaaagaaaagattcccttgaacaaa
tgggtcagcgtctccgttgagagaagcggcaggaagggattgatgcggatcaataacatg
gaacaagtcactggagaatcaccgaaatcccgtaaggcaccccataccgctctcaatctg
aaagagcctctatatgtgggtggaactccagatttcagcaaattagccagggctgctgct
gcctcttcaagctttcaaggagccattcagaagattaccattaagggactgcccgttctg
agagaagaaaacatccgcagtgccattgagatctctactttccgcggccatccttgtacc
cagaaacctttcccttgccagaacagtgggctttgttctcctattaaaggcgactatgaa
tgtgtttgccagaggggtttttcaggcagccattgtgagaaagtgaccattgagaaagca
gcaggagaatctgaggcagtatcatttgatggcaagacttacttggaatatcacatcgct
gcagccaaaagccaactaactaacgagatacctgaaactggccttgtggacaatccagat
gatcccagtgagaaggtgctgctagtgaaccaatttgatctgagcatcaagacagaagcc
actcagggtctcatcctgtggagcggaaaagggacagaacgtgcccattatattgccttg
gctgtggttgatggttatgtccaaatgacttatgatctaggctccaagcctgttgtccta
cgatccacagttcgggtgaacaccaacaaatggacgcacatcaaagctgtacgagataac
cgagatggcattttgcatgttggcaatgaggcccctgtccatggatcctctcctcttgga
gtcaaagaactggagactgatggagccctatggctgggtggaatagagaagctgagtatg
tcatacaagctgcccaaagcatacagcacgggtttcattggctgcatgaaggatgttcta
gtggaccaacaagagctgcacttagaggaagatgcattgaataaaccacccatattatac
tgctcagccaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (142)   
   KEGG ORTHOLOGY (1)   
   RefGene (138)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (11)   
   Pfam (11)   
All databases (175)   

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