KEGG   Xenopus laevis (African clawed frog): 394300
Entry
394300            CDS       T01010                                 
Symbol
itsn1.L, itsn-A, itsn1
Name
(RefSeq) intersectin-1
  KO
K20045  intersectin
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    394300 (itsn1.L)
Membrane trafficking [BR:xla04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    394300 (itsn1.L)
  Lipid raft mediated endocytosis
   Caveolin-mediated endocytosis
    394300 (itsn1.L)
 Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    394300 (itsn1.L)
SSDB
Motif
Pfam: SH3_9 SH3_1 SH3_2 INTAP EF-hand_4 EF-hand_1 EF-hand_7 EF-hand_6 EF-hand_5 EF-hand_8
Other DBs
NCBI-GeneID: 394300
NCBI-ProteinID: NP_001080955
Xenbase: XB-GENE-5904211
UniProt: O42287
Position
2L:complement(13705544..13806321)
AA seq 1270 aa
MAQFGTPFGGNLDIWAITVEERAKHDQQFHGLKPTAGYITGDQARNFFLQSGLPQPVLAQ
IWALADMNNDGRMDQLEFSIAMKLIKLKLQGYPLPSILPSNMLKQPVAMPAAAVAGFGMS
GIVGIPPLAAVAPVPMPSIPVVGMSPPLVSSVPTVPPLSNGAPAVIQSHPAFAHSATLPK
SSSFGRSVAGSQINTKLQKAQSFDVPAPPLVVEWAVPSSSRLKYRQLFNSQDKTMSGNLT
GPQARTILMQSSLPQSQLATIWNLSDIDQDGKLTAEEFILAMHLIDVAMSGQPLPPILPP
EYIPPSFRRVRSGSGLSIMSSVSVDQRLPEEPEEEEPQNADKKLPVTFEDKKRENFERGN
LELEKRRQALLEQQRKEQERLAQLERAEQERKERERQDQERKRQQDLEKQLEKQRELERQ
REEERRKEIERREAAKRELERQRQLEWERNRRQELLNQRNREQEDIVVLKAKKKTLEFEL
EALNDKKHQLEGKLQDIRCRLTTQRHEIESTNKSRELRIAEITHLQQQLQESQQLLGKMI
PEKQSLIDQLKQVQQNSLHRDSLLTLKRALETKEIGRQQLRDQLDEVEKETRAKLQEIDV
FNNQLKELRELYNKQQFQKQQDFETEKIKQKELERKTSELDKLKEEDKRRMLEQDKLWQD
RVKQEEERYKFQDEEKEKREESVQKCEVEKKPEIQEKPNKPFHQPPEPGKLGGQIPWMNT
EKAPLTINQGDVKVVYYRALYPFDARSHDEITIEPGDIIMVDESQTGEPGWLGGELKGKT
GWFPANYAERMPESEFPSTTKPAAETTAKPTVHVAPSPVAPAAFTNTSTNSNNWADFSST
WPTNNTDKVESDNWDTWAAQPSLTVPSAGQHRQRSAFTPATVTGSSPSPVLGQGEKVEGL
QAQALYPWRAKKDNHLNFNKNDVITVLEQQDMWWFGEVQGQKGWFPKSYVKLISGPLRKS
TSIDSTSSESPASLKRVSSPAFKPAIQGEEYISMYTYESNEQGDLTFQQGDLIVVIKKDG
DWWTGTVGEKTGVFPSNYVRPKDSEAAGSGGKTGSLGKKPEIAQVIASYAATAPEQLTLA
PGQLILIRKKNPGGWWEGELQARGKKRQIGWFPANYVKLLSPGTNKSTPTEPPKPTSLPP
TCQVIGMYDYIAQNDDELAFSKGQVINVLNKEDPDWWKGELNGHVGLFPSNYVKLTTDMD
PSQQFRLGVKPAGGIPATGDRPFILFPFRDGPSLLPNAFQAPPLSVVMIKFRCFTAPRFC
PDMNVKYINI
NT seq 3813 nt   +upstreamnt  +downstreamnt
atggctcagtttggaactccgtttgggggtaatttggacatctgggccataacggtggag
gaacgagctaaacatgaccagcagttccatgggctcaagccaacagctggatatatcaca
ggtgaccaagctaggaattttttccttcagtccggcctcccccagcctgtgctggcacag
atatgggccctggctgacatgaacaatgatgggaggatggaccaactggagttctccata
gctatgaaattaatcaagctaaaactacaaggttacccgttgccctctattctcccttcc
aatatgttgaagcaaccggttgccatgcctgctgctgctgttgcggggttcgggatgagt
ggaatcgtgggcattcctcccctagcagctgtagcccctgtgccaatgccatccatccca
gtagtaggaatgtctcctcctcttgtgtcctctgtccccacagttccacccttgtctaac
ggggctcctgcagtaatacagtctcatcctgctttcgctcactctgccacattgccaaag
agttcttcattcggccgctcagttgccgggtcccagataaacactaaacttcagaaagct
cagtccttcgatgttccagcccccccacttgtcgttgaatgggctgtgccatcgtcttca
agattgaagtacagacaattgttcaacagccaggacaaaaccatgagtgggaatttaaca
ggtcctcaggcaagaactattcttatgcagtcaagtttaccgcaaagccagctagctaca
atatggaatctttcagacattgaccaagatggaaaactaacagccgaagaatttatatta
gctatgcacttaatagatgtggccatgtctggccagccacttcctccaatcctgcctcca
gagtatattcccccatcttttagaagagttcgatcagggagtgggttatccattatgagc
tctgtgtctgttgatcagcgcttgccggaggaaccagaagaagaggagccacaaaacgcg
gacaaaaagctcccagtgacatttgaagacaagaaaagggagaactttgagcgaggaaac
ctagaattagaaaagaggagacaggcacttttagagcagcagcgcaaagagcaggagagg
ttggctcagctggaaagggcagagcaggagagaaaagaacgagagcggcaagatcaagag
cggaagcggcagcaagacctggaaaaacagctggagaaacaacgagaactggagcggcaa
cgggaagaggagcgcagaaaagaaatcgaaaggagagaggcggcaaaaagagaactagaa
aggcaacggcagttggagtgggaacgaaacagaaggcaagaactccttaatcaaaggaat
agagagcaagaggacattgttgtcttaaaagcaaagaagaagactctagagtttgagctg
gaagctctaaatgataaaaagcaccagttggaaggaaaactccaggatatccggtgtcgc
ctcactactcaacggcacgaaatagaaagcactaacaaatccagggaactgaggatcgca
gagatcacacacttgcagcagcagcttcaggaatctcagcagctgcttggaaaaatgatt
cctgagaaacagtcccttatcgatcaattaaagcaggttcaacaaaacagtttgcacaga
gattccttgcttacactaaaaagggcattggaaaccaaggagattggacgccagcagctc
cgagatcagttagatgaagtagaaaaagaaacgcgagctaagcttcaggaaatcgacgta
tttaataaccaattaaaggaactgagagaattgtacaacaagcagcagttccagaaacag
caggactttgaaactgagaagatcaagcagaaagagctggaacgaaaaaccagcgagctg
gataagctgaaggaggaggacaaaaggcggatgctagagcaggacaagctttggcaggat
cgcgtgaagcaggaagaggaacgttacaaattccaagatgaggagaaagaaaaaagggaa
gaatccgttcagaagtgcgaggtggaaaagaaaccagagatccaggagaaacccaacaaa
ccgttccaccaacctccagagcctggaaaactaggagggcagattccctggatgaatacg
gagaaagcccctctaacgatcaaccagggcgatgtgaaggttgtgtattaccgagcactc
tacccttttgatgcccgaagtcatgatgaaatcactattgagcctggrgacattatcatg
gtggatgaaagccaaacyggagagcctgggtggctgggaggtgaactgaaaggaaaaacg
ggctggtttcctgccaactatgcagagcgaatgcccgagagtgaatttccaagcacaact
aaaccagcagcagaaactacagccaaacccactgtccatgtggcaccttcccctgttgca
cctgcagcttttacaaatacatctacaaattccaacaactgggcagacttcagctcaacg
tggccaaccaataacactgataaagtagagagtgataactgggatacatgggcagctcaa
ccatctctaactgttcccagtgctggtcagcacagacagcgctctgcttttaccccagca
actgttactggatcatcgccatctcctgtacttggtcagggtgaaaaagtagaaggcctt
caggcacaagccttgtatccttggagagcaaagaaggacaaccatcttaattttaacaaa
aatgatgttatcacggttcttgaacagcaggatatgtggtggtttggggaagttcaaggt
caaaagggctggtttcccaaatcctatgtaaagcttatatccggtccactaaggaaatct
acaagcatcgattccacgtcttcagaaagcccagcgagtttaaagagagtctcttcacca
gcatttaaacctgccatccaaggagaagaatacatatccatgtacacatatgagagcaac
gagcaaggagacttgacctttcagcaaggagatctgattgtggtgattaaaaaagatggc
gactggtggactggcacggtgggagagaagactggggttttcccttccaactacgtgagg
cccaaagactcggaggcggctggaagcggaggaaagacaggaagtcttgggaagaaacca
gaaattgcccaggttattgcatcttatgcagcaactgctcctgaacagctaacactggct
cctggccaacttatcctcatccgaaaaaagaatccaggaggatggtgggaaggagagctg
caggcacgtgggaagaagcggcagattggatggtttccagcaaattatgttaagcttttg
agccctggyacaaataaaagcacgccaackgaaccwcccaaaccaacgtcattgcctcct
acatgccaagttatcgggatgtacgattatatcgcgcagaatgacgacgagttggccttc
agtaaagggcaggtgattaacgtgctgaacaaagaggatcccgactggtggaaaggagaa
ctgaatggccatgttggtctgtttccctccaactacgtgaaactgaccacagacatggat
cctagtcagcaattccgtttaggagttaaaccagcaggtggaataccggcaacaggagac
cgcccgtttattttatttccgttccgtgacggcccctccttgttaccgaatgcgttccag
gctccccctctntcagttgtgatgattaaattccgttgtttcactgcacctcgattttgt
cctgatatgaatgtaaaatatataaatatataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (58)   
   KEGG ORTHOLOGY (1)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (13)   
   RefSeq(nuc) (7)   
   GenBank (3)   
   EMBL (3)   
Protein domain (10)   
   Pfam (10)   
All databases (92)   

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