KEGG   Xenopus laevis (African clawed frog): 446333
Entry
446333            CDS       T01010                                 
Symbol
thoc5.L, fmip, thoc5, thoc5-a, thoc5-b
Name
(RefSeq) THO complex subunit 5 homolog A
  KO
K13174  THO complex subunit 5
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    446333 (thoc5.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    446333 (thoc5.L)
   03041 Spliceosome [BR:xla03041]
    446333 (thoc5.L)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     446333 (thoc5.L)
Spliceosome [BR:xla03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    446333 (thoc5.L)
SSDB
Motif
Pfam: FmiP_Thoc5 DUF4175
Other DBs
NCBI-GeneID: 446333
NCBI-ProteinID: NP_001086498
Xenbase: XB-GENE-6251494
UniProt: Q6DFL5 A0A974I5C4
Position
1L:complement(156824244..156842934)
AA seq 678 aa
MASDSLKKRKPKVNRNEDVKRGRHEDQEGRYYSEEAEVDVRDPKEDYQLYKDTCLDLQRL
MSEIQELKSKGSRDSALEIEEKKVQSCVHFMTLKKLNRLAHIRLKKARDQTHEAKQKVDA
YHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSVEEFYSKAPVAISKPEITSTDPHQ
QTLSRLDWELEQRKRLAEKYKECLASKEKILKEIEIKKEYLNSLQPQLNSIMQASLPVQE
YLSMPFDCMHKQYETARHLPAPLYVLFVQASAYSQACDRKLVVTIEGNVEEARALFKPPE
DSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLCVTITLKCKEGSTLTLTFY
FLMNLNILTVKVKILPAFELSTAISAGDLLNPDLMLSCLYQGDDGKTTPNPANQYQFDKI
GILSLSDYISELGHPYIWVQAMGGLHFPTDQPQPAVVADNALSANHMEKTIKLLRTRLLS
RLSLHRQFASLEHGSIPVSLECQSFFPAKVISRLTKWNVITYEDYLALPYTKDVIECGLA
KETDQYFNLLIERGTAKLNGVVVLNPGYCAVPPVFSLCLNWKGERLSSNDDNIRVMESEV
NVYYKELCGPPPGFQLLTNQIQRLCMLLDVYLETERHDNSVEGPHEFPPEKICLRLLRGP
SRTKPFKYNYPQGFFSHR
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggcttcagattctttaaagaaaagaaaacccaaagtgaatcgaaatgaggatgtaaag
agaggtcgccacgaagaccaggagggtcgatattacagtgaagaggctgaagtagatgta
cgagatccaaaagaagactatcagctgtacaaagatacttgtcttgatttgcagagattg
atgtctgaaattcaagaattaaagagtaaaggaagccgagacagtgctttggagattgaa
gaaaaaaaggtccaaagttgtgtgcacttcatgactctgaagaaactcaatcgattggcc
cacattcgacttaagaaagctcgagaccaaactcatgaggctaagcagaaggtggatgca
tatcatttgcagctgcaaaacttgctatatgaagtcatgcatctacagaaagagatcaca
aaatgtctggagttcaaatcaaagcatgaagagattgagctagtgagtgtggaggaattt
tacagtaaagcacctgttgccataagtaaaccagaaattacttccactgatccccaccag
caaaccttgtcacgtctagactgggagctggaacagaggaaaaggcttgcagagaagtac
aaggagtgtctggccagcaaggagaagatacttaaggagatcgaaattaaaaaggaatat
cttaacagtttgcagccccaacttaacagcattatgcaggcttcactgccggttcaagaa
tatttatccatgccatttgattgcatgcataaacagtatgagactgcacgccaccttcca
gcaccactgtatgtgttatttgtccaggctagcgcctacagccaagcttgtgaccggaag
cttgtggtaaccattgaagggaatgtagaagaggcaagagctttgtttaaaccaccagaa
gactctcaagatgatgagagcgattctgatgccgaagaggagcagacaacgaagcgacgg
cggccaacacttggagttcagttggatgataaaaggaaggagatgcttaaaaggcatccc
ctgtgtgtgaccatcacattgaagtgcaaagaaggaagcactctaaccctgactttctac
tttctcatgaacctcaatatcctgactgtgaaagttaaaattctgccagcttttgagctc
tctactgccatctctgctggggacctgttgaatccagatttgatgctgagttgtttatac
caaggtgatgatggaaagactacaccaaatccagcaaaccaatatcagtttgataaaatc
ggaatcttgtccctcagtgattatatatcagaactgggacatccctatatatgggtgcaa
gcaatgggaggacttcattttccaacggaccaaccacagcctgcagttgtagcagacaat
gctctcagtgctaatcacatggagaagactattaagttgctgaggaccagattgctctca
cgtttatctttgcaccggcagtttgcctccttagaacatggtagtatccctgtatctttg
gagtgccaatctttttttccagccaaggttatatctcgactgacaaagtggaatgtcatc
acctacgaggattatcttgcactgccgtatacaaaggatgttatagagtgtggattagca
aaggaaacagaccagtattttaatctgctcattgaacgaggaacagctaaacttaacgga
gtagtggttctgaaccctggttattgtgctgtaccgccagtgttcagcctttgccttaac
tggaaaggggaacgtttgtccagcaatgacgacaatatcagggttatggagagtgaagtc
aatgtctactacaaggaactgtgtggccctcctccaggattccagctgctgacaaaccaa
attcagagactctgcatgctgttagatgtctacctagaaactgagcgccacgacaacagt
gtggaagggcctcatgagtttcctccagaaaagatctgtctgcgcctactcagggggcca
agccgtaccaagccattcaagtataattaccctcaaggatttttcagtcaccgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

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