KEGG   Xanthomonas oryzae pv. oryzae KACC 10331: XOO1064
Entry
XOO1064           CDS       T00235                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III tau and gamma subunits
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
xoo  Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo03030  DNA replication
xoo03430  Mismatch repair
xoo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xoo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    XOO1064 (dnaX)
   03430 Mismatch repair
    XOO1064 (dnaX)
   03440 Homologous recombination
    XOO1064 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xoo03032]
    XOO1064 (dnaX)
   03400 DNA repair and recombination proteins [BR:xoo03400]
    XOO1064 (dnaX)
Enzymes [BR:xoo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     XOO1064 (dnaX)
DNA replication proteins [BR:xoo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     XOO1064 (dnaX)
DNA repair and recombination proteins [BR:xoo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     XOO1064 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_16 AAA_22 AAA_14 AAA_5 ResIII AAA_7 AAA_18 AAA_19 PIF1 Mg_chelatase nSTAND3 AAA_24 TsaE AAA_2 TniB SKI
Other DBs
NCBI-ProteinID: AAW74318
UniProt: Q5H403
Position
1086888..1088984
AA seq 698 aa
MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCETGTSADPCGQCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKF
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
DQIQGQMTRILAAEQIESDLSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRTM
LGTVDRTQVGAMLQSLADGDGARLMQVVAALAEFSPDWSGVLEALAEALHRVQVQQLVPS
VAFVGDGIDPTPFAAQLRPEVVQLWYQMALNGRRDLYLAPSPRAGFEMAVLRMLAFRPAA
AVPAGGSDDGRGTTAGGGARSAAAGGQAAAPALAAPVTAAPPMVAATAAVTDTMPVAAAE
ASLPASATQATPTPAAAPAPAPVVMLPPQESSSPSRASAASARIDDTPPWAVDDAPVRTQ
ATTASDTMAVLAPEAAMASPSSAPVELAQPVAIASDAAEDAPVSVATSSPAALVEPSSFA
EPAVVTPPATAVSAADSAADASALLDDGCIADAEQWLELVTRSGLNGPSRQLAANAAFIG
HRDGVLRLALAPGFEYLHSERSIANLAQALAPVLGNTPRIVIETGSADVETLHERANRQK
GERQSAAETAFMNDPTVQLLIQQQGARIVPDSIRPYDE
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgtcctatctcgttctcgcccgcaagtggcgcccgaagcgttttgccgaactcgtaggc
caggaacacgtggtccgcgcgctcagtaacgcgctcgacagtgggcgcgtgcatcacgcg
ttcctgttcaccggcacccgcggcgtgggcaagaccaccattgcgcgcatcttcgccaag
tcgctcaactgcgagaccggtacaagtgccgacccatgcggccagtgcccggcctgcctg
gacatcgacgccggtcgttacatcgacctgctggagatcgatgccgcgtccaacaccggc
gtggacgatgtgcgcgaggtgatcgagaacgcgcagtacatgccctcgcgcggcaagttc
aaggtttacctgatcgacgaagtgcacatgctgtccaaggcggcgttcaatgcgctgctc
aagacgctggaagagccgccggagcacgtgaagttcctgctggctaccaccgacccgcag
aaattgccggtgacggtgctgtcgcgctgcttgcagttcaacctcaagcggctggacgag
gaccagattcagggccagatgacccgcatcctggccgccgagcagatcgaatcggatctg
tcggcgattgtgcagctgtccaaggcagccgacggctcgttgcgcgatggcctgtcgctg
ctggatcaggcgatcgcctatgccggcggcgcgctgcgcgaggacgtggtgcgcaccatg
ttgggcacggtcgatcgcacccaggtcggcgcgatgctgcaatcgctggccgatggcgat
ggcgcgcgcctgatgcaggtcgtggccgcgctggctgagttttcgcccgattggagcggg
gtgttggaggccctggccgaggcgttgcatcgcgtgcaggtgcagcagctggtgccgtcg
gtggcctttgttggcgacggcatcgacccgactccttttgcggcgcagttgcggccggaa
gtggtgcagctgtggtaccagatggcgctcaacgggcgtcgtgatctgtatctggcgccc
agtccgcgcgctggcttcgagatggcagtgctgcgcatgctcgccttccgccccgctgcg
gcggtgccggctggcggctcggacgacggacgcggcaccacggcgggcggtggtgcgcgt
tctgccgctgccggcggtcaggctgctgcgccggcactggcagcgccggtgacagctgcg
ccccccatggtggccgcgactgctgcggtgacggatacgatgcctgtggcggcggcggag
gcgtccctgccggcatccgcgacccaggcaactccgactccggccgcagctccggcgccg
gctcccgttgtcatgcttcctccccaagaatcttcttcgcccagtcgcgcgtctgcagcc
agcgcgcgcattgacgacacgccgccgtgggcagtggacgatgcgccggtgcgcacgcag
gccacaactgcgtccgacacgatggccgtgcttgcgcctgaagccgcgatggcttcgccg
tcgtccgcacccgtcgagctcgcacaacccgttgcgatcgcgtccgacgccgcagaggac
gctccggtttcggttgcaacatcttcgccggccgcgcttgtcgagccctcatcgtttgca
gagccagcagtggtcacgccaccagcaacggcagtatccgcagcagactcagcagccgat
gcatcggctttgctcgacgacggctgtatcgccgatgccgagcaatggctggagctggtc
acgcgcagtggcttgaatggaccgtcgcggcagctggccgccaacgccgcgtttatcggt
catcgcgatggcgtgctgcggctggcgctggcgccgggttttgaatatctccattccgag
cgctccatcgccaacctcgcgcaggcgttggcaccggtgttgggaaacacgccgcgcatc
gtcatcgaaaccggtagcgccgatgtcgaaaccttgcacgagcgtgccaaccgccagaaa
ggcgagcgccagagcgcggccgaaacagcctttatgaacgacccgacggtgcagctgctg
atccagcagcaaggcgcgcggatcgtccccgattccatccgcccttacgacgagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (34)   

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