KEGG   Xanthomonas oryzae pv. oryzicola BLS256: XOC_2896
Entry
XOC_2896          CDS       T01873                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
xor  Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    XOC_2896 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xor03400]
    XOC_2896 (uvrB)
DNA repair and recombination proteins [BR:xor03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XOC_2896 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      XOC_2896 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 UB2H Cytokin_check_N
Other DBs
NCBI-ProteinID: AEQ96999
UniProt: G7TK66
Position
complement(2961046..2963067)
AA seq 673 aa
MTDRFQLVSPYSPAGDQPAAIDKLVANFEAGLAKQTLLGVTGSGKTYTIANVVQQVQKPT
LVMAPNKTLAAQLYGEFKSFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLSATKTLLSRRDSLVVATVSAIYGLGAPEDYLSLRLILSVGEHIDQRQLIRHLTDLQ
YTRNEFELTRGAFRVRGEVLDVFPAESDTEALRIELFDGDIEQLTLFDPLTGETLRKLQR
YTVYPKTHYATTRERTLSAVDTIKEELKERLEQLYSQNKLVEAQRLAQRTQFDLEMMAEV
GFCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMYKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYELRESAGEVTELVVRPTGLID
PVVEIRPVGTQVDDLMSEIHERIKLGDRVLVTTLTKRMAENLTEYLGEHGIRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNLRGKAILYADKMTRSMQAAIDESDRRREKQVEYNLEHGITPESVERPISDIMEGA
REDAAEKKSGKGRSKSRQVAEETPDYRAMKPAEIAGKLKSLEQKMYQHAKDLEFEAAAQI
RDQIQKLKTASLA
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgaccgaccgttttcagctcgtatccccatactcgccagcgggcgaccagcctgccgcc
atcgacaagttggtggccaactttgaggctgggctggccaaacagacgctgttgggggtg
accggttcgggcaagacctacaccattgctaacgtcgtccagcaggtgcagaagccgacc
ctggtaatggcgccgaacaagacgctggcggcgcagttgtatggcgagttcaagtcgttc
ttcccgcacaacgcggtggagtacttcgtcagctactacgactattaccagccagaggct
tacgtgccgtcgtcggacaccttcatcgagaaggacagttcgatcaacgaacacatcgag
cagatgcgtttgtcggcgaccaagaccttgctgtcgcggcgcgattcgctggtggtggcg
acggtgtcggcaatctatggcctcggcgcgccggaagactatttgtcgctgcgcctgatc
ctgtcggttggcgaacacatcgatcagcgtcagttgatccgtcatctcaccgacctgcag
tacacccgtaacgagttcgagctcacgcgcggcgcttttcgcgtgcgcggcgaggtgctg
gatgtgttccctgccgagtcggataccgaggccctgcgcatcgagttgttcgatggcgac
atcgagcagctgacgctgttcgatccgctcaccggcgagaccttgcgcaagctgcagcgc
tataccgtgtacccgaaaacgcattacgccacgacgcgtgagcgtacgttgagtgcggta
gacaccatcaaagaagagttgaaagagcggcttgagcagctctactcgcagaacaagttg
gtcgaggcgcagcgtctggcgcagcgcacgcagttcgatctggaaatgatggccgaagtg
ggtttctgcaacggtatcgaaaactactcgcggcatctcaccggcaaggcacccggcgag
ccgccgccgaccttgttcgattacctgccgccggacgcgctactggtcatcgacgagtcg
cacgtgaccattccgcagatcggcgcgatgtacaaaggcgaccgctcgcgcaaggaaacg
ctggtggagttcggcttccgcttgccgtctgcgctggataaccggccgctgcggttcgaa
gagtgggaagcgcgttcgccgcgcagcatttacgtgtcagcgacaccgggtccttacgag
ttgcgcgagtcggctggcgaggttacggagttggtggtgcgcccgactggcttgatcgac
ccggtagtggagatccgcccggtgggtacgcaggtcgatgacctcatgtcggagattcac
gaacgcatcaagctcggcgaccgcgtgctggtgaccacattgaccaagcgcatggccgaa
aacctcaccgagtacctgggcgagcatggcattcgggtgcgctatctgcactcggatatc
gacaccgtggagcgtgtggaaatcattcgcgacctgcgtctgggcaaatttgatgtgctc
gtcggcatcaatctgctgcgcgagggcttggacatgccggaagtgtcgctggtggcgatc
ctggatgccgacaaggaaggcttcctgcggtcgaccggttcgctgatccagaccattggg
cgcgccgcacgcaatttgcgcggcaaggccattttgtatgccgacaagatgacccgttcg
atgcaggcagcgatcgacgagagcgatcgccgccgtgaaaagcaggtcgagtacaacctg
gaacatggcatcacgcctgaatctgtcgagaggccgatctccgacatcatggaaggtgcg
cgcgaagatgcagccgagaagaagtcgggcaaggggcgttcgaagtcgcgtcaggtcgct
gaggagacacccgattaccgcgccatgaaacccgcggaaatcgccggcaagctcaagagc
ctggagcagaagatgtatcagcacgcaaaggatcttgagttcgaggccgcagcgcaaata
cgcgaccagatccagaagctcaaaacggcaagcctggcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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