KEGG   Xenopus tropicalis (tropical clawed frog): 100038164
Entry
100038164         CDS       T01011                                 
Symbol
egr1
Name
(RefSeq) early growth response protein 1
  KO
K09203  early growth response protein 1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04371  Apelin signaling pathway
xtr04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    100038164 (egr1)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    100038164 (egr1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xtr03000]
    100038164 (egr1)
Transcription factors [BR:xtr03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 SP/KLF family and related proteins
    100038164 (egr1)
SSDB
Motif
Pfam: DUF3446 DUF3432 zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2HC_2 zf-BED zf-H2C2_5
Other DBs
NCBI-GeneID: 100038164
NCBI-ProteinID: NP_001090830
Xenbase: XB-GENE-853412
UniProt: A4II20
Position
3:48248147..48251735
AA seq 499 aa
MAAAKTDMLVSPLQISDPFSSFPHSPTMDNYPKLEEMMLLNPGAPQFLGAAVPEGSGFNS
PVEGSEQFDHLAADAFSDMSLSGEKAVIESSYANQSARLPSLTYTGRFSLEPAPNSSNTL
WPEPLFSLVSGLVGMANASPSSAPSSSPSSSSSSSSQSPPLSCSVQSNDSSPIYSAAPTF
PNSSPELFPDQSPQPFQNASTASIPYPPPAYPVSKTTFQVPMIPDYLFPQQQGDVSLVSA
DQKPFQAMESRTQQPSLTPLSTIKAFATQTSQDLKTINSTYQSQIIKPSRMRKYPNRPSK
TPPHERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH
TGEKPFACDICGRKFARSDERKRHTKIHLRQKDKKADKATPVSVASPVSSYSPSASTSYP
SPVPTSYSSPVSSAYPSPVHSSFPSPTTAVTYPSVTSTFQTHGITSFPSSIVTNSFSSPV
SSALSDMSITYSPRTIEIC
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggcagctgccaaaaccgacatgctcgtctcacctctgcagatctcagatccgttcagc
tcgtttccccattccccgactatggataactaccccaaattggaggagatgatgctgctc
aatcccggggctcctcagttcctgggtgccgcagtccccgaaggcagcggcttcaattct
ccggtggagggaagcgagcaattcgatcacctagcagcagatgccttctcagatatgtca
ctgagtggtgagaaagctgtgatagaatccagctatgccaaccagagcgccagattgcca
tctctaacatatactggtcggttctccttggaacctgctcccaacagcagtaatacccta
tggccagagcctctcttcagccttgtcagtggacttgtggggatggctaatgcatccccc
tcttcagcaccttcatcttcaccatcctcctcctcatcatcatcatcacagagcccccct
ctgagttgctctgtacagtcaaatgacagcagccccatatactctgcagcaccaacattt
cctaattccagtcctgaactctttcctgaccagtcacctcagcccttccaaaatgcttct
actgcttccattccatacccacccccagcataccctgtctcaaagactaccttccaggtg
ccaatgatcccagactacctgtttccacagcaacagggagatgttagcctggtatctgca
gatcagaaacccttccaggctatggagagcagaacccaacagccttctctcacacccctg
tctaccatcaaggcctttgcaacccaaacttcacaggacctcaagactatcaacagtaca
tatcaatctcagatcatcaagccaagcagaatgaggaaatacccaaaccgccccagtaaa
acacctcctcatgagagaccatatgcctgcccagttgagtcctgtgacaggaggttctct
agatctgatgaactgacaagacacatcaggatccacactgggcagaagccattccagtgc
cgcatttgcatgaggaattttagcagaagtgaccatttaaccactcacatccgcacacat
acaggggagaagccatttgcctgtgacatttgtggtcgaaagtttgctaggagtgatgag
aggaagaggcacactaaaattcacttgaggcaaaaggacaaaaaagcagataaagcaact
cctgtttcagttgcttctcctgtttcttcatactctccctcagcgtcaacatcttaccct
tctcctgtgccaacttcttattcctcacccgtttcttcagcttacccatctccagttcac
agttccttcccatctcccaccacagcagtcacatatccctcagttacctccaccttccag
acccacggtatcaccagctttccctcttcaatagtgacaaactccttcagttcgcctgtg
tcctcagcactttccgatatgtcgataacatattccccaaggacaattgagatttgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (24)   

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