KEGG   Xenopus tropicalis (tropical clawed frog): 100380111
Entry
100380111         CDS       T01011                                 
Symbol
h2ac16
Name
(RefSeq) histone H2A type 1
  KO
K11251  histone H2A
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03082  ATP-dependent chromatin remodeling
xtr04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100380111 (h2ac16)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    100380111 (h2ac16)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xtr03036]
    100380111 (h2ac16)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xtr04147]
    100380111 (h2ac16)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    100380111 (h2ac16)
Exosome [BR:xtr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100380111 (h2ac16)
SSDB
Motif
Pfam: Histone_H2A_C Histone CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 100380111
NCBI-ProteinID: XP_004919333
Xenbase: XB-GENE-5793646
UniProt: A0A1B8Y828
Position
6:4251099..4251671
AA seq 123 aa
MSGRGKQGGKVRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLRAT
RII
NT seq 372 nt   +upstreamnt  +downstreamnt
atgtccggcagaggcaaacaaggcggcaaggttcgggctaaggccaagacccgctcatcc
cgggctgggctgcagttcccagttggccgtgttcaccgcttgctgaggaaaggcaattat
gccgagcgggtgggagccggagctccggtctatctggccgcagtactcgagtacctgacc
gctgagatcctggaattggccgggaacgctgcccgggataacaagaagacccgcatcatc
cccaggcacctgcagctcgctgtgcgcaacgatgaggagctgaacaaactgctcggaggg
gtgactatcgctcagggcggggtcctgcccaacatccagtccgtgctgctcagagccact
cgcattatctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system