KEGG T01011: 100489468

Xenopus tropicalis (tropical clawed frog): 100489468

Entry

100489468         CDS       T01011

Symbol

krt62

Name

(RefSeq) keratin, type II cytoskeletal-like

K07605

type II keratin, basic

Organism

xtr Xenopus tropicalis (tropical clawed frog)

Pathway

xtr04382

Cornified envelope formation

Brite

KEGG Orthology (KO) [BR:xtr00001]
09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    100489468 (krt62)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xtr04812]
    100489468 (krt62)
   04147 Exosome [BR:xtr04147]
    100489468 (krt62)
Cytoskeleton proteins [BR:xtr04812]
Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Types I and II: Acidic and basic keratins
     100489468 (krt62)
Exosome [BR:xtr04147]
Exosomal proteins
  Exosomal proteins of epithelial cells
   100489468 (krt62)
  Exosomal proteins of other body fluids (saliva and urine)
   100489468 (krt62)
  Exosomal proteins of colorectal cancer cells
   100489468 (krt62)
  Exosomal proteins of bladder cancer cells
   100489468 (krt62)

SSDB

Motif

Pfam:

Filament Keratin_2_head TPR_MLP1_2 ATG17_like DUF1664 Baculo_PEP_C KIF9 TSNAXIP1_N COG5_N CENP-F_leu_zip DUF4407 CCDC113_CCDC96_CC ADIP BicD DUF948 LSU Phage_GP20

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Xenbase:

UniProt:

Position

2:148041375..148050887

AA seq 570 aa
MSHYKQFSVRSVATSGKPGFSSFSVSKSGGGFGGSSGGGSFGSRSLYSVGSRKVSSVGSA
SGGGFGFAAGGFGGRGFGGGVGGGAFGGAGGGAFGGAGGGAFGGAGGGGFGGAGFGGFGG
AGFPGGPSVGIQEVTVNQSLLAPLNLEIDPTIQKVRLEEREQIKTLNNKFASFIDKVRFL
EQQNKVLETKWSLLQEQGGQVKGSRKNNIDPIFDAYINSLKRQLDALQNDKLRLDGELRN
MQDLVDDFKNKYEDEINKRTSAENEFVVIKKDVDAAYMGKVELEAKVDALTDELNFLRTF
FEAELGELQAQISDTSVVLSMDNNRALDLESIIAEVKSQYEDIAKKSRAEAESVYQGKVQ
ELQASAGEQGDVLRNTKSEISELNRKSQRLKAEIENVKKQIAKLQASITEAEERGDLVLK
DAQSKLAELEAALQKVKQDMARQLREYQELMNVKLALDVEIATYRKLLEGEEFRLNSDVN
NVSISVISSGGKSSLGGGGGGSGAGFGFGSGGAAFGGSGGAAFGGSGGAAFGGSGVSFGS
GGGGFSSSSSSFGGGVGSVRYSSSQSSYRS

NT seq 1713 nt +upstreamnt +downstreamnt
atgagtcattataagcagtttagtgttcgatctgttgcaacctcaggcaagccgggcttc
agctcattttctgtgtctaaaagtggtggaggttttggaggttcttcaggagggggtagc
tttggtagcagaagtctttacagtgtggggtctaggaaagtcagttccgttggctctgca
agtggaggtggctttggatttgcagcaggtggttttggtggaagaggttttggtggtgga
gtaggtggaggagcttttggaggggctggcggtggtgccttcggaggagctggcggtggt
gcctttggaggagctggcggtggtggctttggaggagctggatttggaggctttggaggt
gctggctttcctggtggaccatcagttggtattcaagaagtcacagtcaaccaaagtctc
ttggcaccactgaacctggaaattgatccaactatacagaaagttcgactggaggagaga
gaacaaattaaaactctgaacaacaaatttgcttcctttattgacaaggtccggttcctt
gaacaacagaataaggtacttgaaactaaatggagcttattgcaagagcaaggaggccaa
gtaaaggggtcaagaaaaaacaacattgaccctatttttgacgcctatatcaacagcctc
aagaggcaactggatgctctgcaaaatgataaactacggcttgatggggagttaaggaat
atgcaagacttggttgatgattttaaaaacaaatacgaagatgaaattaataagagaaca
tcagctgaaaacgagtttgttgttattaagaaggatgtggatgctgcttacatgggcaag
gtggagctggaagccaaagtagatgctctgacagatgaactcaacttcctgaggaccttc
tttgaagctgaactgggtgagttgcaggctcagatctctgacacctctgttgtcctgtcc
atggacaataaccgagctttggatctggaaagcatcatcgctgaggtgaagtctcagtat
gaagacatagcgaagaagagcagagctgaagctgaatctgtttaccaaggcaaggttcaa
gagttgcaggcatctgcaggtgaacaaggagatgttctgcgcaacacgaagagtgagatc
tctgagctcaaccgcaaatcccagagactgaaagctgaaattgaaaatgtcaagaaacag
atcgccaagctgcaagcatctataactgaagcggaggagcgtggggatcttgttctgaaa
gatgctcagtcgaaactcgccgagctggaggctgctctgcaaaaggttaagcaggacatg
gctcgccagcttcgggaataccaggaactcatgaatgtgaaactggctctggatgttgaa
attgctacttacagaaaactgctggaaggagaagaattcaggcttaattcagatgtcaat
aatgtcagcatttctgtcattagttctggtggcaaaagttccctaggaggaggaggtggt
ggatctggagcaggattcggcttcggaagtggtggtgctgcctttggtggaagtggaggg
gctgcctttggtggaagtggtggcgctgcctttggtggcagtggcgtttcctttggctca
ggaggtggtggattcagctcctcaagctcctcatttggtggtggtgtcggcagtgtgcga
tattcatccagtcaatccagctacaggagttaa

All links

Gene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (24)   

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