KEGG   Xenopus tropicalis (tropical clawed frog): 448766
Entry
448766            CDS       T01011                                 
Symbol
srsf1
Name
(RefSeq) serine/arginine-rich splicing factor 1
  KO
K12890  serine/arginine-rich splicing factor 1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040  Spliceosome
xtr05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    448766 (srsf1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    448766 (srsf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    448766 (srsf1)
Spliceosome [BR:xtr03041]
 Common components
  Common spliceosomal components
   SR proteins
    448766 (srsf1)
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_3 RRM_7 Nup35_RRM_2 CoV_nucleocap
Other DBs
NCBI-GeneID: 448766
NCBI-ProteinID: NP_001006919
Xenbase: XB-GENE-486875
UniProt: Q6DII2
Position
2:76104964..76111058
AA seq 267 aa
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGG
GGGGGAPRGRYGPPSRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVE
FVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNS
RSRSYSPRRSRGSPRYSPRHSRSRSRT
NT seq 804 nt   +upstreamnt  +downstreamnt
atgtcagggggcggcgtgattagggggccggcgggtaacaacgattgccgtatctatgtt
ggcaatctgccgccagacatccgcaccaaggacattgaggacgttttctacaagtatggg
gccattcgggacatagacctaaagaaccgcagagggggcccgccattcgcctttgtggaa
ttcgaagatccaagggatgcagaagatgctgtctatggtagagatggctatgattatgat
ggctatcgcttgcgtgttgagtttccaagaagtgggcgaggagctggaggcagaggtggt
ggtggtggtggcggcggcggaggaggaggtggtggaggcggcggcggcggtggtggtggt
ggcggcggaggaggagctccccgagggagatatggacctccatcaagacgttcagaatac
agagtggttgtgtcagggttgcctccaagtggcagctggcaggatttaaaggatcacatg
cgtgaagcaggtgatgtatgttatgccgatgtgttccgagatggtactggagttgtggag
tttgtgaggaaagaagatatgacatatgcagtacggaagctggataacactaaatttagg
tctcatgagggagagactgcctacattcgtgttaaggtagatggtccaagaagtcccagc
tatggaagatcgcggtcacgcagccgcagtcgtagcaggagccgtagtagaagcaacagt
cgcagccgaagttactctccaagaagaagccgtggttctccacgctactctcctcgccac
agcagatctcgctctcgtacataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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